AMCG00000767


Basic Information

Item Value
gene id AMCG00000767
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3056422 ~ 3061712 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000767
TTATTTACTCCTGTATTTACTGATGTGTTGTTtcctctgtgtatttatttgtaatacatttttaatactgcACTGTGGACGCTCACTTTCCCAGCCCTACACTAGCCCTGATGCCAGCGTCCATCCCGCACCGATCCAGCAGATGTCGCTGTTGGTCGCTCCGTCAGGCCGGGCCTCCTCAGTGCACGGAGGATCAGCAGACTCCGACATCTCCTAGCTCGCCCTCCCGCCTCATGATCGGCATCCGCGCCGCAGCCGCCGCCTTCTCTCTCATCGCCGCAGCCAGGAGCATGAGCGCCGCAGCGGGCCCCTCTCCGGCGGGCGAGCAGGACAGTCCGGGACGCTGGCTCAGACTCTCCGCCGTCCCGGGCTGCGAGCCGCAGCGGGTCAACGAGGTGCTGCTGCTCCGGCCCGCAGGAGCTCGGAGTCGGTGCGGCGATGGCGCAGAGGAGGCGAGGCAGCACGTCGTGTTCTTCCCCGGGGATATCCAGaACTTCCAGCAGGAGATGGCGGCCCACCAGGAGAATGGCCAGTGGCAGCACTGGAGTCTGGAGCGGGTGGCCGAGCTGCTGTCCCACCGCTTCCCCGGCCGGCACGTGTGGGTGGTGCGGGCGGCTCAGATGTACCTGCACAAGTTCAGCTGCTATGAGAACTTCGTGGAGAGCAACGCGTTCGGAGCCCCGGAGCACTCGCCTGACCACGGGGCCTTCCGACACCTGCGGGGGCTGCTGACCCACGCCATGGAGCGGGCCGGCCTTCTCGCGGCCCCCAGCAGCCCGGTCTGCACGCCCATCAGCAACGGCTGCCCGGCGCCGAGCTGTGCCGCCGCGTCAGAGCCTTGCCCTTTGCCCCCTGACCTCACGCTGACCCTGGTGGGCTTCAGCAAGGGCTGCGTGGTCCTGAACCAGATGGTGTACGAGCTGGCGGGCGCCCGGGCCGACCCCGAGCTGGCCCCCTTCCTGGCCAGGGTGCAGGACATGTACTGGCTGGACGGGGGGCACCCGGGAGGCAGCGAGACATGGGTGACCAACAGGAAGGCCCTGCAGGAGCTGGTGTCCAGCGGCATCGGGCTGCACGCCCACGTCACCCCCTACGAGGTGCAGGACCCCATGCGGGCCTGGGTGGGCCGGGAGCACCGGCGCTTCGTGAGGACGCTGCAGGAGCTGGGGGCGCCGCTCGTCAGCAAGCTGCACTTCCAGGACGAGCCCCCGTCCTTGGACAACCACTTCGGGGTCATCCGGGAGTTCTGAGGGGGCCGCCGAGAACTCTGAACCGCCGGCGGGGGGTTCCCTGTGTCCTTCGTTCCCGGCTCCTCTCATCTCATCACTTCTCTCATCTCGGCCGAGGTTCATATTTGCTTTGATGGGGATGCTTAAtcagactttattttttttctgttgaaagTTCTGATGACGTTGAGGATTGAAAACTGCACTTGAGGAACCTGCGTGGCTGGGAAAGCGGCTGAATGTGTTAAGTAAAAGCGGTGACTGGATTCAGGTGTGTGTGGCTGTGGCAGCTCTGGAGATCGGGGCGGAGAAGTTGACAACCCTAATGTTTTATGGGTTTTTTTTGCCGtttgattaaatgattaaaatctCTGTTTCCTGAAGTTAGAAGGCGTCCGTGCTTGAGGCTCAGTGTTGCAGGGGCTTCATAACTAGTTTCCCCACATCTAGCTGTGCTTTCAAACAGCTGACAGACCTGTTCATCTGGGAGCCACACTGACGCAGTAAAACCCCCGCCTGGCCCTTCAGGATTGTCCAAGACCCTCACTTAAATAACGTACCGGACCTCCTGATGGTTTCTTTCATGCCCCAGTGGACTTGGCCGCCCCGCACAGCTGGAAAAACGTGCAAAATGTGAaagcatgtatttgtttgtttgttttagaaattatttttgcTAATTTCCAAATGTTACGGATTTATTTATTCTCGGACAAGCCCAGCCTGTGATTTATTGTGTTTGCGATCATATTTTGTGTTCATTGCGTCtgattattagtttatttttttaagagcagGGCTGGGGGCCCTTCCTCTCTGTCACACCTGGGGGCCACCAGCCCTGCCGACGCTGGAAAAGACCGGGCATTTCTCTGCATTGGGATCTGAGTCTTGGAATATCTTAGTTTTCTGCAGAACTAAGCTTCCCTCGATCCGATGCCCACGGGAAGGGGGGCGAGCTGTGGGTGGGGTTGTCCAGTCTGTTTTCCTTGGACTCCAGCCCTGTGGATGTGGCCCCATGGCGGATGTCTGTGACGCTCCAGCTGCTCTCCGCCTCAGACGCCGCAGTCCTCCCGCTCCGTCGGCGCTTTGAAGCGGGCGCGGCGGCCCCCCGGTGACCCCTGCGCTCCGGGGTCGGGCCCCACCGCTCTGACTTAACGGGGACTCCAGATGTGGTTTCAGCACAGCAGCACTAATCCACGTCAAGGGATGTTTACGATCGATGTCTTTCATGTTGTGATGATCTGAGGTTCCTCTCGCTGCCAGACGCGGCCCCCCTGCTCCCTTACTCCAGTGTGGAGCGAGGAAGGTCGTGCGTTCATATCCTGTTTCTGTGGCAGAGAAGCGCTTCCACGGGCTGCGGTGCGGGAGGCGAGCTTGTAACCTGAGCTCGACGCACACAAGCTGGCAGAGCCCGGTATTTGTATGCTTATGAAAGCGTCCgtatgtgtgttattattttccagtttgtgtgtatacatacagtatgttaCCACAAGTATGATGACAACAGGCACAATACAGACGAGCTGGTGTTGACAAGGTGTGTATTGTTGGGTGTAGGCCTACCTTTAGCCTCTAGTGCTACTACATCAACTGAGCAGTTTCTAATGCAGCCACGGATATAGTCTCTAAAGTTTGCATCCTGACTAGCTGTCAGGTTTGTCCCCGACCTGTTCAGTGGCATGGACTTTACAAGGCAATAAAGCGGTGTGTTGCACAGCCATCTTTGTGACACTGTGTTACTGTGTAGACGGGTCGGCCCTCAGCACAAACTTCAGTCAATACAGACAGAACTGGCGTCTCTTAATAGCACAGGATGGATTGTGCAATACTTGTGCCATTACTTTtggtaatataatgtatataaatacacctGCAAAAAGTATGtcttaataaatatacacatttatagtGACTTATTGCAATATGTAGTGAAAATAAGTATCACTAATTACAAAGTAAATACTATGAACATTAAGAGAGTTGTAAGCAAGAATgtagtttgtatgtgtgtgtgtatatctacatacacacacctttatatgtattatttgcgGTCTTCTTATCCATTCcatagtttaaatatttatttcaggtaATTGTGCTTCTTAGGcagctgtttgttgttttataaaacaagtGTGTTAAGAAGTTGGGCATCCCTTTGAAGCTATACATCTCCGCTTCAGTGGAAAATCAGCACCTTACCAAGTTGTCAAAACGTCAGTTCCTTTTGTGTATCAAAGAAAGTATTTTTACTGTGCTGGAATGACTGTTGTGGAGTTTACCTGCACCTATAGACAGTATCTACAGTGTGGTATTCAGTAGGGAATGGAGGTCCATGATTAAGCCTCAGAGATGTTAAAGTAGGCCCCAGTGATTTGAAGATCTTTTGCtcataaatctgttttttagttttaaagagTTATGTAGCACAATTCTGATTTTGAGCTAGAAGAGATGATGAGATAGTTATATTTCAAGGGCTAATACATGCTGCTGCGGTTTGAATTGtgtgaaaatacaaatcaacatGCTTCtggtaaaatgaaaaacaaataggaaTTCAGAGATGGTGTGCCTGTCCGCTGTGAGGCTGCGGCCGTGGACAGGAAGTGGTTCGGCCTTTAACGGTGGCTGTTGTGATAGTTGCCTGATGCAAAGCTGTCAAACAATAGtgacttttgaaaacaaataaaatgaatggaagGTCAATAAAGTGTGTTTGTTGACTCGCAGACTGGGTTGCGGAGAGCAGAGTGACAGGGTCGAGGAATACGAGCCGTATCAGTCCTCAGGTGCACCGTGAAGCTGCGCTGTTTGAACAGGGACAAACTTGTTTGCGTTTCTATTCACACGAACACAGTGACATTGAATggctgccacacacacactgacctcaTGCGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000767 True 4140 mRNA 0.53 2 3056422 3061712

Neighbor

gene id symbol gene type direction distance location
AMCG00000768 NA coding upstream 18689 3024518 ~ 3037733 (+)
AMCG00000769 tmeff2a,tmeff2,LOC107670719,LOC107728299 coding upstream 45062 2996513 ~ 3011360 (+)
AMCG00000766 tmeff2,LOC106581686 coding upstream 78511 2960489 ~ 2977911 (+)
AMCG00000764 dnah7 coding upstream 537394 2467362 ~ 2519028 (+)
AMCG00000760 LOC106581656 coding upstream 593938 2423045 ~ 2462484 (+)
AMCG00000774 hspd1 coding downstream 60636 3122348 ~ 3133195 (+)
AMCG00000772 sf3b1,LOC107731751,LOC106586372 coding downstream 80545 3142257 ~ 3155509 (+)
AMCG00000773 NA coding downstream 96704 3158416 ~ 3181118 (+)
AMCG00000781 NA coding downstream 152448 3214160 ~ 3225281 (+)
AMCG00000783 NA coding downstream 164601 3226313 ~ 3233199 (+)
G126050 NA non-coding upstream 171238 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 289883 2766255 ~ 2766539 (+)
G126036 NA non-coding upstream 498165 2557992 ~ 2558257 (+)
G125986 NA non-coding upstream 535837 2427670 ~ 2520585 (+)
G125955 NA non-coding upstream 762550 2291835 ~ 2293872 (+)
G126068 NA non-coding downstream 20034 3081746 ~ 3083587 (+)
G126215 NA non-coding downstream 493854 3555566 ~ 3558424 (+)
G126240 NA non-coding downstream 590961 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 609090 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 664208 3725920 ~ 3730056 (+)
AMCG00000734 NA other upstream 1242265 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1357849 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1450391 1599696 ~ 1606031 (+)
G125561 NA other upstream 2652831 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 2399589 5461301 ~ 5465981 (+)
G127134 NA other downstream 5555487 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 7038571 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8937952 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 9227238 12288950 ~ 12385042 (+)

Expression


Co-expression Network