AMCG00000783


Basic Information

Item Value
gene id AMCG00000783
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3226313 ~ 3233199 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000783
ATGGCGGCCCGGAGCCCCTGGGAGACCCCCATGCCGCTGATCGTGAGCGGGCCGGACCTCTGCCTCCGGGTGGACATGGACACGGTGGAGCGGCTGTCCCGGATTACCGCCGCCGTTACAGGACAGGGAAGGGCTGGGTTTGAACTGGGGTGCACTGTGCAGTCCAAAACCAAAGGCCTGTGGATTTTGCCAATCCCTCACCCCACCAAACCCAACCACACTATCCTCCTGGTGGACACAGAGGGGCTCGGCGATATCGAGAAGGAGAGGAGGTGCTTCACGTTCCCGATGCCAGCCCCTGAAGACAGGCTGTCTGATCTGGAGCAGGCGGACTCGGAGGAGCTGAGCGAGGTGTTCATGGAGCGTCTGCAGGAGCTGATGGAGCACGTGTTCACTGCAGCCCATCCCAAAACCCTGGAGGGTGTGGCACTGAACGGCAAAGCCTGGGCCGGCCTGGCAGTCGAGTACACCAAGGCCATTGACAGCCGAGAGGTGCCCTGCATCGAGAGCTCCCTCAGCCTGGTGGTGCGGAGGGTCAACGAGGACGCCAAGTCCGACAGCGTGTTCCTCTACACCTCCGCCATGAAGAGCACCCTTTCCAGGCTGCCCGTCCCCGTGGCCCAGCTCGCCCACACCCACCAGGACAGCGCCACTGCCGCCCTCCGTAACTTTGCAGAAAAGTGCCTTCTGGACCGAGACAACGAGTGTGCCAAGGAGCTAGGGGTGTTCCTGGAGAAGCAGCTGCAGGAGTGGTCCCGCCGCAACGACAGCGAGTCCGAGATGTTCTGCCGGGACCTCctgaaggaggagaggaagcCGCGCCGCAATTTCCTGAAGCCAGGTGGCCACCAAGACTTCGTCCGCATGGTGGAGAGTGTCAGGCAGGCCTACCAAGACACCCCCAACAAGGGGCCCAAGGCGGAGGAGGTCCTGTCCCGGTTCCTGAGTGAAGTTCAGAGCGACGAGGAGGAGATCCTCATGGTGGACAGCAGCCTCAGCGAGATGGAGAAGCTGAAATCCAGACAGGAGACCGACCGCAAGGTTCTAGAGCAGGAGAACAGAGTCCTGAAGGAGAAGATGCAGTTCATGGAAACGTCGTTTGAGTCGGCCATGAAACAGAACGAGGACACGATGGATATTCTGCTGAGGAAGATCACAGACCTGGGCTCGGAGGCTCAGAACTACTCCCAGATGGTGCAGGCCCTGGAGGAGCGCGTCCAGCAGCTGCGGCAGCACAGAGACCGCCCCCGGCATAATCCCCCGGCCTCAGCCCGAGAGTGCCTCGTGATGTGAGGAGACCTGGGCTGGGCTTGTGATCCGGAGTGACCAACTTGGGAAGGAAGAGCAGGGACTTCCCTGTGCTGACCCCCCTGGGACCTTCTTGTATAGAAGTGCAGTAGACCGTACTTAAATATAAACTAATATCAAGCACATGTGTGCACTGGGACTTTTTATGCCCTCCTAGTTCTCGATTGCCAGTGTGTTCAGGCTTTAGTCTTGGTGCGTCtgttgatttgtgtgtttttatctaTATTCCTGTTTAAAGAATTGGGTTTTTTCCTACTTTTGTATTGCATATGTGAAAGTCAGTGCCTTTCAGTAAACCTTTTGAGAAAtatgaaacagaaagaaaaggatgATTTTCAGAGAGACACATTGGATTAGTAAGTAAACATGGGCCATTCCTGCAGGGTTCCCTCGTGTCTCGAGCTCCAGCTCAAGTTGCCCGGGTTGGTAGATGTTCTCTGCTGGTCTGGAATCCACACCTCTGAAAAGGACATTGAAGGACTGTAGGGCAGAATGGGCTTGACTGCTCGAATTGTACTGGTCAGTTCATGGTTATCTGAATATTCCTTATGAAAACCAGCAGACCTTTATAACACGGCtgtttctgatatttttctACCTAAATTgcttatttacttattcatgttatttcttGACTTTCAGTGCCCTTTTCCTTTATATATTCACATGTGGTATAATTTAGTGTGCAGCTGCTTTAATTACTAGCTTGATTGATTTTGACTCTGATTGGTTGCCTTTTCAAAGGCACCACACCTGGTGTAGGAGTTCTGCAACCAGTCAGGTTTTAATTAGGGGAATCACTGTCCAATAATTAAGCCAATTCCAGTGCTCTTTAGAGTGGAGGTAGTGCAGCTGAAATCTGTAGGCAGAATTGGCTGTACGGTTGGATCTGAGTATAGACCAAAAGTAGATTAGAGTACAAGAGCCGCCTAGACCAGAGTAAGTGGGTTTGGCCGTGGCTCAGCTACTCTTAGAGTGGCTAGCCTGATTGATAGGGTGCTACAGAGCATAAATGTGTATCCACTGTATTTGACTTAGTTTATTGTAgtggttttcatattttaacccattttatacttttaatttgcaatccctttgtctttttattccctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000783 True 2422 mRNA 0.52 9 3226313 3233199

Neighbor

gene id symbol gene type direction distance location
AMCG00000781 NA coding upstream 1032 3214160 ~ 3225281 (+)
AMCG00000773 NA coding upstream 45195 3158416 ~ 3181118 (+)
AMCG00000772 sf3b1,LOC107731751,LOC106586372 coding upstream 70804 3142257 ~ 3155509 (+)
AMCG00000774 hspd1 coding upstream 93118 3122348 ~ 3133195 (+)
AMCG00000767 NA coding upstream 164601 3056422 ~ 3061712 (+)
AMCG00000780 NA coding downstream 7036 3240235 ~ 3249229 (+)
AMCG00000782 NA coding downstream 18611 3251810 ~ 3258580 (+)
AMCG00000779 NA coding downstream 28982 3262181 ~ 3263241 (+)
AMCG00000787 NA coding downstream 81669 3314868 ~ 3373247 (+)
AMCG00000786 NA coding downstream 145239 3378438 ~ 3385899 (+)
G126068 NA non-coding upstream 142726 3081746 ~ 3083587 (+)
G126054 NA non-coding upstream 157850 3010243 ~ 3068463 (+)
G126050 NA non-coding upstream 341129 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 459774 2766255 ~ 2766539 (+)
G126036 NA non-coding upstream 668056 2557992 ~ 2558257 (+)
G126215 NA non-coding downstream 322367 3555566 ~ 3558424 (+)
G126240 NA non-coding downstream 419474 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 437603 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 492721 3725920 ~ 3730056 (+)
G126368 NA non-coding downstream 1011533 4244732 ~ 4245036 (+)
AMCG00000734 NA other upstream 1412156 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1527740 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1620282 1599696 ~ 1606031 (+)
G125561 NA other upstream 2822722 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 2228102 5461301 ~ 5465981 (+)
G127134 NA other downstream 5384000 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 6867084 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8766465 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 9055751 12288950 ~ 12385042 (+)

Expression


Co-expression Network