AMCG00000784


Basic Information

Item Value
gene id AMCG00000784
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3233421 ~ 3237636 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000784
AAGGGAGACCTGGGTGAGTAGACCAGACTGCACGATTTCTGCCGCAGACTTCCAAGTCTtttataggctatataaatgATAGTCAAAGCTAAAAAAAGTCTTTAAATAATGCGTTACTTTTTCCTTAAGAACGTATATAAAGTTTCTGAGGAATAACTCAATATTAGACCAATTACAgaatgtttatgtgtgtgtttgtatgataGATGCTATATCATATTTATGTCATTTTAGGATGCAGACCTGTAAGTGGCAGCATTAACATGAATATCAATCCTGGAATCtaatcaaatgaaaaagtaattacTTATTCTCCAGAAACTTAATCAGAGTTGAATAATTGGTGACATTATGTTTCCATTTCGGGTTTCATGTGACATGCAGGCGAACTTTctcttcattgttttgtttcaaaaaaacatctgattcaatgttgtgtggttgtgttacactaaacaaaatgttgggaacaacataattgtattttcttaacatAATTCCATGTTAAGAAACAATATTATGCCATATTGTTCTGGAAAAGTCCAGTATTGTGTTATCTGTTTGTTTCCTTGTGTTGATTTTTCCATTGTCCCTTTTTCAACACCACTTTGTGTAACCATGTAGCCTACATTTCCCCTAAGgacatttcttgttttctggTTATTGTTATCATCACTACATAcgctttcaaaatatatattttttgtagatTTGCATCACAATGAAGACTTTTGTTGTTATCTGTGTGCTCGGCTGTCTGGGGATTGTATCGGCTACAGCTGTTGAAGATGATAAGCCAGATATAGAAGTTGAAGCAGGAGAGTGGGACTCCTACTGTGACACTAACTTCCCCGAGATGCGAGATAGCCAAAACTACACCGATGGGATAATTGTCTACTCGCTCTTCAGATCATCTCTGAACTTCACCGATGCTGAGATTTTCTGCCGGAGAAGATACAGGAACGGGCACCTGGCTTCCATTCACAGTTATAGGACCAACCGAATCCTCACGTGCCTGACAAGCCACAACTCCCGTGTAAAACGCGCCTGGTTGGGTGCCTACGAGCTTTTCTCGAGTGCCAAGTATGTGTGGTCTGATGGTACCAAATGGGACTACGCCAACTGGGTGAGAGGCTGGCCGAGGAGATACAGTCAGTCCTGTGTGGAGATTAACTGGAAACGTGTCGGCCAATGGAGTGACCATAGCTGTTCCGTGAGGAAGCAGTTCGTGTGTGAGCACAGACACTGAGGGATCGCTCCGCCACAGACATAGCCCGGAGGCCGGCCCGGGATGTGATCTCCACTGAATTACTGCACTGCCTCAACTAGCATCGCAAACAAACCCATGCTGTCTTTCACCTTCTTAAAAGATATATACAAATCTTAGTATTTGATAATATTTATAGcttcaaaataattaagcatttgaaCCCATGCTTATATAAGGAATCATGATTagaagtggaagtggaagtTCATTTATCGATTTTACTTCAAAAATGGAAACATCAATGGCTGAAGGGGGTAACTTGCTTTCGCAAAACATAGTTATGCAATAAAGAGCTTTTGAAGAACATGATCAACACGTTGtgtctattttt

Function

GO: NA

KEGG:

id description
ko04672 Intestinal immune network for IgA production

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000784 True 1601 mRNA 0.40 5 3233421 3237636

Neighbor

gene id symbol gene type direction distance location
AMCG00000785 LOC106586374 coding downstream 27810 3181479 ~ 3205611 (-)
AMCG00000778 hspe1,LOC107690609 coding downstream 109621 3122208 ~ 3123800 (-)
AMCG00000776 NA coding downstream 130190 3083455 ~ 3103231 (-)
AMCG00000775 NA coding downstream 154878 3065810 ~ 3078543 (-)
AMCG00000770 NA coding downstream 177542 3052881 ~ 3055879 (-)
AMCG00000788 NA coding upstream 38622 3276258 ~ 3314125 (-)
AMCG00000794 NA coding upstream 273483 3511119 ~ 3517210 (-)
AMCG00000795 NA coding upstream 307653 3545289 ~ 3568649 (-)
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding upstream 338801 3576437 ~ 3582185 (-)
AMCG00000803 NA coding upstream 356646 3594282 ~ 3611390 (-)
G126037 NA non-coding downstream 675172 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 713201 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 770933 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1405679 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 1656075 1575361 ~ 1577346 (-)
G126275 NA non-coding upstream 313204 3550840 ~ 3552977 (-)
G126296 NA non-coding upstream 436645 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 1007093 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 1399731 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 1400322 4637958 ~ 4638285 (-)
G126096 NA other downstream 84169 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 92932 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 183405 3044167 ~ 3050016 (-)
G126089 NA other downstream 191457 3036931 ~ 3041964 (-)
G126017 NA other downstream 775538 2451868 ~ 2457883 (-)
AMCG00000804 NA other upstream 315411 3553047 ~ 3656561 (-)
G126427 NA other upstream 1398460 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1719502 4957138 ~ 4982651 (-)
G126700 NA other upstream 2335069 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3451932 6689568 ~ 6733817 (-)

Expression


Co-expression Network