AMCG00000786


Basic Information

Item Value
gene id AMCG00000786
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3378438 ~ 3385899 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000786
ATGGGGAAGACCACCACCGGCTCGTACAGGATCCGGATATATGAGCGGCCTGACTTTGCTGGTCACATGATGGAGTTCTCAGAGGACAATCCCGCCGTGTATGAGCGTTTCCGCCACAGGGAGGTCCACTCCTGCAGCGTGCTGGACGGCGCCTGGGTGTTCTTCGAGCACCCCAACTACCGTGGGCGGCAGTACCTGCTGGAGCGCGGAGAGTACCGCCGTTACGCAGACTGGGGCGCGATGCACGCTGCCGTCGGCTCCTTCAGACGCATCATGGAGTTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000786 True 285 mRNA 0.61 2 3378438 3385899

Neighbor

gene id symbol gene type direction distance location
AMCG00000787 NA coding upstream 5191 3314868 ~ 3373247 (+)
AMCG00000779 NA coding upstream 115197 3262181 ~ 3263241 (+)
AMCG00000782 NA coding upstream 119858 3251810 ~ 3258580 (+)
AMCG00000780 NA coding upstream 129209 3240235 ~ 3249229 (+)
AMCG00000783 NA coding upstream 145239 3226313 ~ 3233199 (+)
AMCG00000789 LOC102295795,LOC102199121,LOC101478098,LOC102798094 coding downstream 51384 3437283 ~ 3482542 (+)
AMCG00000792 NA coding downstream 104842 3490741 ~ 3504965 (+)
AMCG00000791 NA coding downstream 131823 3517722 ~ 3522353 (+)
AMCG00000793 NA coding downstream 147240 3533139 ~ 3547238 (+)
AMCG00000790 NA coding downstream 183514 3569413 ~ 3575908 (+)
G126068 NA non-coding upstream 294851 3081746 ~ 3083587 (+)
G126054 NA non-coding upstream 309975 3010243 ~ 3068463 (+)
G126050 NA non-coding upstream 493254 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 611899 2766255 ~ 2766539 (+)
G126036 NA non-coding upstream 820181 2557992 ~ 2558257 (+)
G126215 NA non-coding downstream 169667 3555566 ~ 3558424 (+)
G126240 NA non-coding downstream 266774 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 284903 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 340021 3725920 ~ 3730056 (+)
G126368 NA non-coding downstream 858833 4244732 ~ 4245036 (+)
AMCG00000734 NA other upstream 1564281 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1679865 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1772407 1599696 ~ 1606031 (+)
G125561 NA other upstream 2974847 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 2075402 5461301 ~ 5465981 (+)
G127134 NA other downstream 5231300 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 6714384 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8613765 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 8903051 12288950 ~ 12385042 (+)

Expression


Co-expression Network