AMCG00000790


Basic Information

Item Value
gene id AMCG00000790
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3569413 ~ 3575908 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000790
gggattctgcagatctgcgcaggaTCGCTTGGCTGGCTGCAGCGCTTTCACTTTCGCTTCCTGGATGATGGCTCGCTAGTTTTCCTGCAGTTGGAGCAGCAGGTCAAACAGAAACTGAACTGAAGGGCGACGACAACGCAGTTCAATTTACTCGGGAAATCACGTCCACTGCGCTGCTGTGCGAGCACAACATTAAAGCCACACAGGCGGTACTGTGCGGGAGAAAGCAaagttttatGTCTGCAGGTTGAGCACCAAGACACAGTGacTGGATTCAAGACCTGAACACAAGACCATGGCTACAGAAGGTTTAGAGATTCCCATTACGCCTGAGATTGGTCAAACCCTGAGCCAACACCAAAATCTCAACCCTGTCGTCCAGAGGAGGTTTGGCTGCAGGGCTGCCCTCAGGAACGTTGAAGGCACGGGGGGGTCTTCCTGGAGCAGCTCGAATGGGTCCTTCAAAGCCGAAGAGAGGTACTCAGTAACGCTGGTCAAAGGGCTGAAGATCTCCGTCTGGAAGGATGACCTCACTAGACACCAGGTGGAGGCTGTGGTCAATGCGGCTAATGCTAGACTAGACCACTGTGGTGGCCTTGCTGAAGCCCTGTCTAAAGCGGGTGGGccagaaatacaagaaaatagcAACCACTTAATTAGCAAAAATGGATGTATAGCTACAGGAGATGCAGTCGTCACAACTGCGGGGAAACTTCCATGTCAAAAAATTATCCATGCGGTAGGACCTCGTTGTAGGCCTCATCCAGATCAAGAAGACATTAAAAAAGCTTCAGGTCTTTTAGAAAAAGCTGTTAATAGTATCCTTAAGAAGGCAGAGGAGCAGAGATTTAAATCAGTTGCCATTCCTGCTCTGAGCTCGGGAATATTTAACTTTCCCCTGCCTCGATGTGCGGAAGTCATTGTGTCTACACTTAAAAAGTATCATGACAATCAATATTCAAAGGCCAGGGGTTTAGAAATCCACTTGGTCAACAATGACGAGCCTTCAGTGTGTGCAATGGAGAAAGCCTGCAAAGAAATTCTCATCCCAAGTAAGTCTTACAGTCAGGCTGCCGGGAGCCCCTCTACTTCAGTGCAGATTGGAAATGTCACCCTGCACGTCAAACAAGGAcgcattgaaaaagaaaagGCAGATGTCATTGTGAATACAGTAGGTACTGATCTTAAATTGTCATTGGGCAACATCTCAAACTCGATTCTGAAATCTGCTGGTTATGAGCTGCAGAAAGCTTTGTATCAATATCAGAATACTCCAGTCTATGGGTCTGTCTTTAAAACTGAAGGATTTTACTTGGATTGCAAAGCTGTGTATCATACAATCTGTTGTTACTATAGAGATCGCAATGCCTCAAAGATACTTGAAACTATAATGTTTAACTGCCTGATAATGGCAGCAGGTGAACACATGAGATCCATCGCATTCCCTGCCATTGGCACTGGTAATCTGGGGTTTCCACGTGATGAAGTGGCCCGGATAATGATCGGCCAGTGTTTCAATTTTGCTTACAATTTCCAAGGGAAGAAACTTgatgttcattttgtaatttttcctGGTGACAAAGAGAATCGCAAGGCCTTTGAAAAAACACTGAGCGATTTTCAGAACACAGGCAATCCCAAAGGTTCATTTGATCATTTTTCTAGTAGTTACCGAGGTGCCGAGGGGCGTTCTGCCGCACAGTCGCGCGATCTTCAGTGGCCTAGTATTGTGCTCTCAGATGGATCTCACGAAGGACAAATGGAAGCAAAGAAATGGATTACCAACACACTGCTTCAAGAGCGTGAAACCCTCACCATAGACAACAACAGTGTTTTCTTCTTTGGCCAGAGGGAGCATGACGAATTGTTGAGTTTCCAGACCATTCACCGTGTGACCATTAAAGTGATGATCAGCAATGGAAAGGCCAGTCTGAGGATTGTGGGACCCCCTCGGGGAGTGGTGGCCGCAGCGCTGGCAGTCGAGTTGCTGTGCTGCCAAGTACAAGAAGAATTTGCGACATGTGAAGAGATCGAGATGTTGCAGTCTTTGGTTCAGTGGCATTGCAACGCCTTACCAGAACTGGCAGAACCGGAGAACAACGCCACTTTGGAAAAAGCCTACTGGGCAGAACATACCTCAAAGACCATTAACGTGAAGGGCAGTACAGTTAACGTTTTGTTTAGAGACAAGAAAGTCGTTGATCACCTAGGAAAGCGTCATGACATTGAAAGAAGATGCCTGTTAAATGTTGACTATACCAAGTTTGGGAAAGGCTCAGACGCATCCTTCCATAAACGAACCCCTGAAAACAGAGCTGGACACTCAAAGAGGACCAAGTTGTTCAATGAAGCCGGTCTTGAGATTGTCACAATTGAAAAGATTGACAACCCGCTTCTGGAAGGGCATTTCCAAGTAAAGAGAAATTTCCTGTCAGCCAAACCGGAAACCATGTACCAGTCAGTCCCGGCCCAGTTCTGTGACCTGGTCTGCCGGGCTGGATTTCACAGACTGTACTCGCAGCCACGTGaagaaaagtTTGGAGCTGGCATATATTTCTGTAGGAAACCCCCCACCCTCAGTTACCAGGAAGATCCTTTTGGGGCAGATGAGTTCATCTACATCTTCGAGGCGCAGGTCCTGACTGGAAAATCCACCAATGGCTCCCCGGGTTTGATTGTGCCCCCTGTCCTCGGGACAGACCCTCTTATACTGTATGACAGTGTTACGGGGGGAACACACACAGCGGTCATTTTCAACAGTCGCCAGGCCTACCCTGAATATTTGATCACTTGCAGAAGGGTGAGGGGTAAGACCACAGTGTAAAGTGTAAAGATATAATACAGACTAGGGTAAAGATCAAGCGAAGAggtgatattttttgtttagggATTATAATCATctaccatttaaaatacataaagaacaAACTCATAGAATACACATATtagatttaatcaaaactcttcTCAGTATTTACTTCTGGataatttttctctctccatacattttgattttctaAAGACCTCTTTGTACACTTCATGGTTAATCCGactcatatgtatatattaactATAGCTGATCGGGATGCTGCCGAGTGTGACTGCTGTGTTTGAAATGCTCCAATTATGTTGTAGTATTGGAGGATTCACCAGCACAGATAAAGCATTTTAACATGTCTTTCTGTATGCAGTTCAACCCACAGTTCACCtagaaatacaatgtatatgCTTAAAGAAACACTGGGTTTATCAAGGGTAATTAAGGGCAATGTAATTGATATGCATATGTGATTAAAAAAGTACAGTGTAGATACAAATGTACTATACTTGGATGTGTGGCATATTCTCTactatatcaataaaataattctgggtatattgtttcttttttcaaatcGTATACT

Function

GO: NA

KEGG:

id description
K15260 PARP9; poly [ADP-ribose] polymerase 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000790 True 3404 mRNA 0.45 10 3569413 3575908

Neighbor

gene id symbol gene type direction distance location
AMCG00000793 NA coding upstream 22175 3533139 ~ 3547238 (+)
AMCG00000791 NA coding upstream 47060 3517722 ~ 3522353 (+)
AMCG00000792 NA coding upstream 64448 3490741 ~ 3504965 (+)
AMCG00000789 LOC102295795,LOC102199121,LOC101478098,LOC102798094 coding upstream 86871 3437283 ~ 3482542 (+)
AMCG00000786 NA coding upstream 183514 3378438 ~ 3385899 (+)
AMCG00000798 NA coding downstream 7272 3583180 ~ 3592142 (+)
AMCG00000797 NA coding downstream 62262 3638170 ~ 3651877 (+)
AMCG00000799 NA coding downstream 80959 3656867 ~ 3660538 (+)
AMCG00000806 c1ql2,LOC104939125,LOC102789465,LOC100698439 coding downstream 110351 3686259 ~ 3698536 (+)
AMCG00000805 NA coding downstream 186911 3762819 ~ 3763343 (+)
G126215 NA non-coding upstream 10989 3555566 ~ 3558424 (+)
G126068 NA non-coding upstream 485826 3081746 ~ 3083587 (+)
G126054 NA non-coding upstream 500950 3010243 ~ 3068463 (+)
G126050 NA non-coding upstream 684229 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 802874 2766255 ~ 2766539 (+)
G126240 NA non-coding downstream 76765 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 94894 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 150012 3725920 ~ 3730056 (+)
G126368 NA non-coding downstream 668824 4244732 ~ 4245036 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding downstream 1300959 4876867 ~ 4880503 (+)
AMCG00000734 NA other upstream 1755256 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1870840 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1963382 1599696 ~ 1606031 (+)
G125561 NA other upstream 3165822 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 1885393 5461301 ~ 5465981 (+)
G127134 NA other downstream 5041291 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 6524375 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8423756 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 8713042 12288950 ~ 12385042 (+)

Expression


Co-expression Network