AMCG00000791


Basic Information

Item Value
gene id AMCG00000791
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3517722 ~ 3522353 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000791
CGACCTCTGTTCTTGGTGAGGTTGTGCTCGCTGTGCTTTCGGCGTCACAATCCTCACGGACACGGCCGAGCTGGAGACTGTGTCCCGGAGTTGTGCGCCAGTGCTAAAGCAGTGCTAAAGCAGTGCTAGTGTTGCAGCCCTGCTCAGATCAGTGCAGACAGCCTGCGCTCTGGGATTGTGTAGGGACGACAGGTGGGGGAGATGGACATGGAGGGCGAGGAGGTGTCGGAGGTGCTACAGCTCTCCGTAGGGGGCTGCAGGTTCGCGGCTCGCAGGGACTCCCTGTGCCGCTTCAAAGACTCCATGCTGAGCTCCATGTTCAGTGGGAGGTTCCCGCTGAGGCGCGACGCGAGTGGCGCCTGTGTGATCGAGCGAGACGGCCACCTCTTCAAGTTCCTGCTGGACTTCCTGCACGGCGAGCTGCACCTGCCCGGGGATGAGGAGACGCGAGCGGCCGTGCAGCGAGAGGCGGATTATTTCGGCGTGCCCTTCCCTCGGTCCCTGACGGACCAGCTGGCGATGGAGCTGGAGGCAGGGGCTGAACGGGAGGACACCCCCTTGCGCCAGGCCCTGGGGGATCTGTGCCAGGCATACGGGATGGTGTGTGCAAAGCCAGCCGTGTGGGTGCTGCACTACCTGAGCGCGTGTGGGGCGAGCTGCGAGAGCAAGGTGCTGGGTGTGTATGGGAGCCAGGAGCTTGGCCTGCAGGCCATGGAGAGACAGCTGGGCAGCAAGACCAACAGCCGTTGTGTGCACCGCAGGGAAGCGGGGGGCAACGTGCAGTATATCTGGAGCTATTACTCCCGCTCCGAGCTGGGGAAGATGATGGATGCCTTTGACAGCTGGGAGGGGCGAGGAGTGAGTTTCTGGCGCGTCCCCCAGGAGCTCATTGAGTGCTGGACTCTGGAGAAACGGCCTCTGCAGGAGAGCCAAGAGCCCCTGTCTCCCAGACATAAGAGGTGGTTCCCTGATTTGCTGgaaaaggaagaggaggaggagccaaGCCCCAAGCGTGTGACAAAGAGGATCACCTTTACAGGCCCGTCCACCAGCACCACCATCCGCGTGAAGAACTCTGGGACGGCGCAGTCCTCCCGGGCCCCACCACGTGTCTCAAACTCTGTCACACAAACGGGGTCAACATCTGCTGCGGCCCAGACTCCTCAGGCACGTGTTGGCCCCAAGCGAGGCATCCCTCCGGATTCCACACCGGCCGAGGGGAAGAGCGGCCATACGAGCTCAAAGATGATGGTGAGGCTGTACAGACCTCTGGCACAGCACCAGCAGCGGGACGCGGCGGCAGCCCCCCCGGCCCAGCCCACGGCCAGCCGCCCCATCCGTCTGAAGAGGCCCCTCCCCCCCGGCAGGGCAGACGTTGTGcatagtgagagagaggggcaggggcAACAGGTGGAGCAGTCAGGGCCGGTCGTAGCCAGGGCTGGGCACCTAGACCTAGGAGAGAGGGGTGAGCCACAGGCCGCATGTGGCAGTGGGACAGCGGAGCGGGAGCGGCCAGCGATGGGCCAGGGGAGCGAGAGAAACGGAGAGGGCTGACCGGTGAATACAGGGGTGAGGCCGGAGCAGTGGCTCTACCGGGCAACAGTGTGTTTAAATTTTCTGATTGCTCAGACCCATCCCTTTCCAAGCCCCCCATCTCCTGTCCTTCCTGAGTTAAGCCCTCTGTGCATCACCCTTCCACAGTCCTACCTCAGCAGCGTCTCCCCTCCCTGGACTGCGACCTCCTCAAGGCACTTCCCAGACCCACCAGAACTTCCTCACTCATTTCCACTGCATTGGGAGAGAGCAGTGCACAGTCAGCGTTGCCTCAATTTCTCTGGCTCTGTGTGTTATCAGGGAAAGCTGGAAACCCTTCGCTGCAGGCTGGGGGCGCTGGCAGCTGCAGCCCTGCCAGGTACAATACTGGCAATTTTACAACAGAGAAGATCCTTCAAATACTGATAGTATAGGAGGGTTAACTCTCTTTGAGCGTACAAAGGGATGTGGACTTAATCACTGATAAACTGTTGGCGTGGCACGTAAGAGTCATCTGTTTGAAGGGACTGTAGTCATATAGTAGCTGCACATAGAGCAGTTTTTTAAACAGCATCACAGTGTTTTTACCCTGTTTTTAAAGGAAGCGTTTGTGCTTCTCCATGTTCGCAAAAGGTGTGAAGAATGTAGTTTGTTACCAGACAGCAAGGGTGCCATGGACATGTGTTTCCCAAATAAATCTGAGAAGAATTAATGTGTGTCTGAATGCGCTCTTTA

Function

GO: NA

KEGG:

id description
K21921 KCTD18; BTB/POZ domain-containing protein KCTD18

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000791 True 2271 mRNA 0.59 7 3517722 3522353

Neighbor

gene id symbol gene type direction distance location
AMCG00000792 NA coding upstream 12757 3490741 ~ 3504965 (+)
AMCG00000789 LOC102295795,LOC102199121,LOC101478098,LOC102798094 coding upstream 35180 3437283 ~ 3482542 (+)
AMCG00000786 NA coding upstream 131823 3378438 ~ 3385899 (+)
AMCG00000787 NA coding upstream 144475 3314868 ~ 3373247 (+)
AMCG00000779 NA coding upstream 254481 3262181 ~ 3263241 (+)
AMCG00000793 NA coding downstream 10786 3533139 ~ 3547238 (+)
AMCG00000790 NA coding downstream 47060 3569413 ~ 3575908 (+)
AMCG00000798 NA coding downstream 60827 3583180 ~ 3592142 (+)
AMCG00000797 NA coding downstream 115817 3638170 ~ 3651877 (+)
AMCG00000799 NA coding downstream 134514 3656867 ~ 3660538 (+)
G126068 NA non-coding upstream 434135 3081746 ~ 3083587 (+)
G126054 NA non-coding upstream 449259 3010243 ~ 3068463 (+)
G126050 NA non-coding upstream 632538 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 751183 2766255 ~ 2766539 (+)
G126036 NA non-coding upstream 959465 2557992 ~ 2558257 (+)
G126215 NA non-coding downstream 33213 3555566 ~ 3558424 (+)
G126240 NA non-coding downstream 130320 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 148449 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 203567 3725920 ~ 3730056 (+)
G126368 NA non-coding downstream 722379 4244732 ~ 4245036 (+)
AMCG00000734 NA other upstream 1703565 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1819149 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1911691 1599696 ~ 1606031 (+)
G125561 NA other upstream 3114131 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 1938948 5461301 ~ 5465981 (+)
G127134 NA other downstream 5094846 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 6577930 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8477311 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 8766597 12288950 ~ 12385042 (+)

Expression


Co-expression Network