AMCG00000795


Basic Information

Item Value
gene id AMCG00000795
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3545289 ~ 3568649 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000795
CCTCCATTGCTGTCGACGCGCATTTGTGGAGAAACAAAACCGAAAGTAAGTAAAGCCCGAGTAAGCGGCGCTGCTCCTCCCCACAGACAGGCGCTTCACAGAGCCATGGCCGAGCGCTACCCGCACCCCGTCCGGGTCGACTGGACCCCCGGCGTCTCCAGCCTGAGAAACAAGCTGCAGATCTACTTCCAGAGCAAGAGGAGGTCCAACGGGGGCGACTGCCAGGTGCAGCAGGACGACCCGGACACCTGCGCCGCTGTCGTGTGGTTCAGAGACGAGGACACAAGGCAGAACGTCCTTGAGAAGAAAAACCATGAGCTGAGGATCGACAACAGAGTGGTGAAGCTGACTGTCAGGCCACAGGAAAAGAcaggagagggagacacagagcCAGTAAAGGCTGACATTGAcacaccagaaaaaaaatCTGCATTGTCTACCCAAAAAGATGCCTCGCTTGAGTCCTCCAAGGAGAGTGTTTCTGACACGCCACGGACAGAAAGTACTGACACACCGGAGGAGGGAGATGTTGAAGAAGCCGCAGAGGCAACTGTGCTGGTGATAGAAAACATCGATGACAAGATGACAAAAGAGTATTTGGAAATGCTAGTGGAGAACATCTCGCATTGTTCTGCAGAATTGGGGGACTTCAGTGTAGAGATCATTTATGATATAAATGCTGCTGTGGTGTCTTTTAAAAAAGGCAATGATGTGCAGAACTTTCTAAAGCAATGCATCAGAAACAAGATGTTTAAACATGGTAAATTGTCTGCCAGACCACTTGAAGCTGCCATGAGTGTGAAAGTAGAGAATCTTCCACCCACAGATACAGATTTCCTGGAGCTCTACTTCGAAAGAGAGGGAGACATTGAAATGATTACATTGCTGGATGAAGAGAAGTCTGCAATTGTCAAGTTTTATGATCAAAAAGTGGCTGAAATTGTACGGAGTAAAGAACATCTCATCAGCAAAGTGCCTGTCAATGTGTACCCATATTACGAGTCCCTGGGTACAGCTCTCTATGGAAAAGACAGACCCCCTGACATGGCTAAAGGCACTGTAGCTATAGCAGGCCTGGCTCAGGAGGTTGACAAACTGAGGCAGATAGTGGTAGGAGTTGTGGACAGAGTCACTAAGAAGATAGAAAGGGAGAAGAACAGCGTAACGGAGGAGGTTGCTGTGGCTCCTGCCATGTTCCACATACTGCAGCAGGACAGGCTCGAGGAGGAAACTGCAGCCAAGTATCCAGAACTGATACTCAAATACGAGGCTAAACACAAGAAGCTCATTCTGTCTGGTTTCACATCTGAAGTTTTCAACATCAAAAGCCACGTTCTGGAGCAGGTATTGcacatgaaacagaaacaggTGGAGGTCCACCCGAATGTTGTCAACTTTCTCGGAGAAGTAGACAGTGAGGAGATGTCCTACTCCCTCTTCACTTCAAAGGGCATCAGTGCTGTGTTTAACATGCAAGAGGGAGCAGTGGTAATTGTAGGAAAGACAGACAAGGCCCTGGCTGATGCGGAAAAGAAGCTGCAGACAGAATTGAGTTTCCACTGCATTGATGTAGAAGACAGAGACGTGCTGAGGAAACCAGAGTGGATGCAGTTAATTACTAGTTTAAAGAAGACTTTCAACTCTCCAAAGAAGACTGTGTCAATAAGACGTACTGAGGTTGAAGATGGTCAAAACCAGATGGTAGTGTCTGGCTTTTGTGATCCAGTAAATAAAACTGGGAAAGAGCTGTCTGAGttcattaacaaatacacacaccgTGATGAGATTGTGCACATCAGATCAAGAGCAATCAATAAATTCATCCAGGACCAGAAAAGCAACATTTGGAGTAAGATAGTAAACAACGATTTGAATATTAAGTTCCACGAACAGAGCAGGCCACCAAACATCACCCTGAGTGGCCCCAGGGTTTATGTTTTGGAAGCCATGAAGATATTTAGAGATCTTGTTTCATCAGTTCACTTTGAAGTTTTGAAGGTCAGAAAACCAGGGGCCAAGAAGTTTTTTGAAGACAAGCAGGAACTATTTGAAAGCATGGCGATGAATAAGGTGAAATGTGTGGTCAGGCTGGAAGATGAAGATTCTTTGGAggcagaggaagaagaggaggctGGTCAGAGTCTTTGTGAGGTGCAGATGTCTGATGGGGTGGTGATCACAGTCTGCAAGGCTGACATCTGTAAGTACTCTGTTGATATTGTGGTCAATGCTTCCAATGAGGATCTGAAGCATATTGGGGGTCTGGCAGCAGCTCTCCTCAGGGCAGCTGGTCAACTGCTGCAGGACCAGTGTGATCGGTATGTCAATGCCAAAGGACCCCTGAAGCCAGGCGAGGCCATCATTACAGATTCTGGCCGCCTCCCCTGTAAACATGTCATTCATGCTGTCGGACCCAGGTTTCACGACACAGACTCCAAGAGATCAGTGTGCCTCCTCAAGAGGGCTGTGAAGGAATGCTTGAAACTGGCAGAGACGCACAACTGCTCCTCCATCGCCATTCCAGCGATCAGCTCTGGCATCTTTGGCTTTCCTTTGGATCTGTGCACAGAAACCATTGCTCAGTCAGTGCGGGAACACTGTCAGGACTTCTACGGTGATAACACTCTGAAGAAGATCCACCTGGTGAACAACGATGACAAAACAGTCAAAGCCATGACAGCCGCTGTGCAGAAAGTGTTCGCTGATGAGGCACCGCAGCAGAGAGGTCTGCAGGGTAAACCTCAACCAAAACCTAAACCTGTGGTGGAACATAGACAATTTGGTAAAGTGGAGAGAAGAGGAGCCCAGGAGACGATACGGACAAAAGAGGGACTGACCATCACCCTCAGGCAGGGCAACATCCAGGACGCATCAACTAAGGTCATTGTGAACACCATCTCAGAGGACTTGGATCTGGACAGTGGGGCAGTGTCCCGGGCCATCCTGAATGCGGCCGGGCCAGAGCTGCAGAACCTGGTGTATGAGGCGGGCTCGGCAGCGACTATGGGGTCAGGATCTGTGCTGGTCACCCAGGGCTGTAGCCTGAGGAGCGACCTGGTCTTCCATGTCATTGTCCCGCACTGGACACAAGGCAAAGGCGCTGCAGAAAAGGCAATGGAAGGCATCATCAAGGAGTGCCTGAAACAAGCTGAGCACCAGAAGCAGAGCTCCGTGTCCTTCCCGGCCATCGGCACCGGAAACCTGGGATTCCCAAAGCCCCTGGTGGCCTCCTTAATGCTGCAACAGGTCTTGAAGTTTAGCAGCAAGGCCAACCCTAGACACCTTCAGGAGGTTGTGTTTCTGCTGCACCCCAGCGACACACAGACTGTGCAGGCATTCACAGAAGAGTTCAACAAGAAGTTTAAAGTGAAACCATCCACAAGTCCTTCGAAAGCAGCTCCTGCTCAgGTACTGAAACAGTATGTGGAAATATTTGTGGGAATGAATTCCTTTGAGgcagctgtttttttccttgtgtTAGGGTTCTATGGGAAGATCTCCTCTCCAAACCTAGGCGTACATGAGATGAAGATCGGAGGGGTCCTGCTGCAGGTCAGCACCGGGGACATCACTAAGGAGAGCACTGACGTCATCGTGAACTCCTCGAACGATCAGTTCTCCCTCAAAGCAGGTGTCTCAAAGGCGATTCTAGAGGCAGCTGGTCAAGCAGTAGAGACAGAGTGCGCACAGCTGGCTGCGCAACCCCATAAAAGGATGATTATGACCCAGCCAGGCAATCTTCAGAGCAAGAAGATTATCCACGTTGCTGGACAGACTGATCCCAGTAATATACGGGAGACCGTCAAGGGAGTTTTGCAGATGTGTATGGACAACAACTTCACATCTGTAGCCTTCCCCGCTCTTGGGACAGGCCAGGGAGGTGCCGACCCCGCTAAGGTCGCAGACGCGATGCTGGACGCCATGGTGGACATCGCCAGTCAGAAATCTGTACTTGTGCTCCAAACTGTACGAGTGGTCATCTTTCAGACCCAGATGCTGCCTGAGTTTTATAAAAGCATGCAGAAGAAAGAGGTTTCAGCACCACCCGAGGATAAATCGTTTTGGGACACTAATGAAACAGaggaaaatcaaacaaaggaGTTTGTCATCCTGGAGGACAAGGTTGATCCAGCGATTTTCCATATCTGCGGCGATACGAGGCAAAGCGTAGAAAGAGCGAAGGAGTGGATTGAAGACTTGATCGTCAAGGAGCAGGAGGAGGTAACCATCGACAGTGATATGATCTACAACTTCACCCCCGAGGAGCACGAGAAGATCATCGACCTTCAGAGGAATCTCCAGGTGACCATGAAGCTGGAGTGCAATTCCACTCAGGCCTACGTCAAGGTAGCCGGCCTGACCAGAGACGTGCTGTGGGCCAACAAAGAAATCCAGGCGATGATCACGAAGATCCGCGATGATATCACTCTGAAACGTGACGCTGAGCTGACCAAGAACCTGGTGGAGTGGCAGTACCAGGAGGGGGACAAGTTCCAGGCCTTTGATACCTTCACCAACCTCAAATTGGAGCAGGCTCTTGGCAACCAGCAGGAGGATGTCTTCATCACCATTCACAAGACGCAGTTCAAGGTGTTCCTTCCATCTGGCCCTGCAGTGGACGAATTCGACAAAAAGATAGAAATAAAAAGAATCAACAAAACTGAAGcCAAACAGTTGGACCTCCCAAAACACTGGGATGCCATGACAGGAGGCCAGGGATGTCTGTCAGTGGTTTTACAAGCAGCAACACCCGAATACAAGGAAGTagatggtttatttaaaatgacttgtCCACAACATGTTATACAGATTGAAAGAATCCAGAACCCCAGCCTGTGGAAGAACTACCAGATTCGAAAGCAAGCCCTGGAGGACAAGAATGGCCACCAAAACAACGAGAGACGTCTATTCCACGGGACCAGTGAACCCACCATTAAAACCATTAACTACCATGGTTTTAACCGCAGCTACGCTGGGAAAAATGCTGCTGCTTACGGGAATGGGACCTATTTTGCAGTCAATGCGAAGTACTCAGCCCAAAACACCTACTCTGTGCCAGACGCCAAGGGCCAGAAGTACATGTACCTCGTCAAGGTCCTCACTGGGGATTTCACCAATGGAAGACCAGGGATGATTGTTCCTCCAGCCAAGAGTGGTTCAGTCACAGATCTGTATGACAGCTTGACTGACAACACCGCCAACCCCAACATGTTCATCATATTCAACGATATCCAGGCTTACCCCGAGTACTTGATCACTTTCCGAGTGAGGTTTGCGAGGCTGTTGAAAGGCACAAAGCTGCCGCTGTCCTCGTACTGCCATTCCACCAAGGTGCTAACCACGGCCGCCTCGCGTTTCTGGGTCTCTTTATTCTCAACCTTCCTGATCATCACCTGGATCTCAGTCATGGCCTTCAGCACGTCTCGCGTCAGCCCTGCCAGC

Function

GO: NA

KEGG:

id description
K15261 PARP10_14_15; poly [ADP-ribose] polymerase 10/14/15

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000795 True 5442 mRNA 0.50 19 3545289 3568649

Neighbor

gene id symbol gene type direction distance location
AMCG00000794 NA coding downstream 28079 3511119 ~ 3517210 (-)
AMCG00000788 NA coding downstream 231164 3276258 ~ 3314125 (-)
AMCG00000784 NA coding downstream 307653 3233421 ~ 3237636 (-)
AMCG00000785 LOC106586374 coding downstream 339678 3181479 ~ 3205611 (-)
AMCG00000778 hspe1,LOC107690609 coding downstream 421489 3122208 ~ 3123800 (-)
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding upstream 7788 3576437 ~ 3582185 (-)
AMCG00000803 NA coding upstream 25633 3594282 ~ 3611390 (-)
AMCG00000800 NA coding upstream 44915 3613564 ~ 3637244 (-)
AMCG00000801 NA coding upstream 81667 3650316 ~ 3650858 (-)
AMCG00000802 NA coding upstream 93598 3662247 ~ 3667451 (-)
G126037 NA non-coding downstream 987040 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 1025069 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 1082801 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1717547 1822252 ~ 1827742 (-)
G125845 NA non-coding downstream 1967943 1575361 ~ 1577346 (-)
G126296 NA non-coding upstream 105632 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 676080 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 1068718 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 1069309 4637958 ~ 4638285 (-)
G126430 NA non-coding upstream 1072409 4641058 ~ 4641341 (-)
G126096 NA other downstream 396037 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 404800 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 495273 3044167 ~ 3050016 (-)
G126089 NA other downstream 503325 3036931 ~ 3041964 (-)
G126017 NA other downstream 1087406 2451868 ~ 2457883 (-)
G126427 NA other upstream 1067447 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1388489 4957138 ~ 4982651 (-)
G126700 NA other upstream 2004056 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3120919 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 4061266 7629915 ~ 7645722 (-)

Expression


Co-expression Network