AMCG00000798


Basic Information

Item Value
gene id AMCG00000798
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3583180 ~ 3592142 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000798
GAAATGCACAGAAGCATGCTTTCGCCTTCCTGCCGGAGGTGGTTCAAACTGTCAGCTCGCTGGGCGGCGGGGCGCTCGGCACTGCGGGAGCAGAGGGAGACACAGCGGGCAAAACGTCCGCTCAGTTGTGCATGTGATGAACACTGTGCTGCACTGGAGATTGCGTATTCTCTAAATACTCCTGCGTAAGATAGtGCCTTGCGAATAGTGCATACGTCATACAGAATGTCATATCTAAGTTCtgGCCTAGAGAGAGGGAACGAACAGCAGGAACAGGCGGACTGGGAGGCAGTAAACCGCTTACTCCGACACCATGGCTTCAAACCAATTCATTTTGCAGACCCCATGGAAAACAGGAATCTAGCAGATCTAGTTCTTTTGGAGAAGAAGTCTGCCTCGGAAATTCAGCTGGTACTGCAGAGCGTGTTAAAGGACACCGAGAGGAGGCAGGTGTTGATACAGGAGCTGATCCAGTCTAACAATCAGTTAAAGGACGaggcacagcagcagcaggcccGAGCCGCGCGGCAGTCCCAGCGGGCCGCGGAGCTGGATGCCATCTTGTCGGGAGTCAAGGCCAAGGTTCAGCAGCTGGAGGACGACTACATCGCCAAGGCCGCGCAGCAGCAGACTCGCATgaagcagctgcagcaggaaaAGAGAGACGCCCAGAAACGCTACCAGTTACTGGAGCAGAAGCTTGGCGAAGAGCGAGAGGTCATTTCGCAGCTGCAGAAGAAGCTTTACTTCACCgtgaaagaggaggaggagagagtgcGGCGACAGAACAACGTCTTCCTACAGATTCGCAAGCGGGCGGCCAAGCCACACTCGCCGCTCGACCAACAGATCCTGGATGTCATCGATGTCTACGAAGCTCAGATTCACGACCTGCGCTCGGAGATCAGGACACACAGCGCCGAACCTGTAGAGGGAAACCCCGAGCATCTGCAGTGTGGCAGAGAAACCGAGAGGAAGCATGCACTAGATGCAACTCCGCATTACAAAGCTCTCCTTGAGTCCTATCAGAGCCAGCTGAAGGAAACCAAAGCCCAGAAGGAAGAACTGAGACGCAGCATCCAGAGCTTGAGACAGGAGTTGGAGTCCAGGCCAACTGCAAAGGAGTTCAAGTCATACCAACAGCAGCTGAAACGGATGGACAGAATTAGCCGGCAGAATAATGTCAAgtctGTGGTAGAGGATGGTGCAGATGCAGGACACGGCACTGGCGTGGAGGATATAGGCGGCATGCAGGACAGCCTCTGCCGGAGCTACCTGAAGAACGTGTGTAAAGAATTGGAAGTGCAGAATTTGAACGATCTTGTTACAGTTGCAAAACTTAGGACGCAGCAAGCAGACTCGGTTCCCAGACTCACTAAGATCCTTAATGCAATAAAGAGCATTTTAAACAACCCGAGGGCTCCACTACTGCTGTACAAGCAGAAGCCATACCCAGAGAGCAAGGGCAAGGAGGAATACGAACATCTTCTACCAACGATAGACTTGTGGGCCGAACAGCTCATCTCTCTGAAGGAAGTCCGCAGTCCCACGCGCAGCACCCTGCAGGCCATGGTGTCCCACTTCCAGAAGCTGTTTGACGTGAACTCCATCAGCGGAGTGTACCCCCGCATGAACGAGGTGTACACCAAACTGGGGGAGATGACCAACGCCATGAGGAACCTGCGAGACATCCTCGTGCTGGATGATGGCGCTCCACCCAGCGCTGTGGTGAACAAGGTGGGGAAGCTGTGCTGCTCAATGTCAATCATCTGGAAGAAATTGTACCTGCAGTGCGATCGCTCAGTGACCGATGAATAGCCtttgtttgattgttgtgcagtttgttttttacatttcaattttgttaaaGTTTTTTAAGTAACTTCTTTAGCTGCCTTAACTTTGAGTCTcaatgtaaattgaaataaagGGTTTATTTCTTCA

Function

GO: NA

KEGG:

id description
K16802 CEP70; centrosomal protein CEP70

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000798 True 1944 mRNA 0.52 17 3583180 3592142

Neighbor

gene id symbol gene type direction distance location
AMCG00000790 NA coding upstream 7272 3569413 ~ 3575908 (+)
AMCG00000793 NA coding upstream 35942 3533139 ~ 3547238 (+)
AMCG00000791 NA coding upstream 60827 3517722 ~ 3522353 (+)
AMCG00000792 NA coding upstream 78215 3490741 ~ 3504965 (+)
AMCG00000789 LOC102295795,LOC102199121,LOC101478098,LOC102798094 coding upstream 100638 3437283 ~ 3482542 (+)
AMCG00000797 NA coding downstream 46028 3638170 ~ 3651877 (+)
AMCG00000799 NA coding downstream 64725 3656867 ~ 3660538 (+)
AMCG00000806 c1ql2,LOC104939125,LOC102789465,LOC100698439 coding downstream 94117 3686259 ~ 3698536 (+)
AMCG00000805 NA coding downstream 170677 3762819 ~ 3763343 (+)
AMCG00000808 ccdc93 coding downstream 316512 3908654 ~ 3928160 (+)
G126215 NA non-coding upstream 24756 3555566 ~ 3558424 (+)
G126068 NA non-coding upstream 499593 3081746 ~ 3083587 (+)
G126054 NA non-coding upstream 514717 3010243 ~ 3068463 (+)
G126050 NA non-coding upstream 697996 2870916 ~ 2885184 (+)
G126044 NA non-coding upstream 816641 2766255 ~ 2766539 (+)
G126240 NA non-coding downstream 60531 3652673 ~ 3656581 (+)
G126248 NA non-coding downstream 78660 3670802 ~ 3673176 (+)
G126301 NA non-coding downstream 133778 3725920 ~ 3730056 (+)
G126368 NA non-coding downstream 652590 4244732 ~ 4245036 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding downstream 1284725 4876867 ~ 4880503 (+)
AMCG00000734 NA other upstream 1769023 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 1884607 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 1977149 1599696 ~ 1606031 (+)
G125561 NA other upstream 3179589 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 1869159 5461301 ~ 5465981 (+)
G127134 NA other downstream 5025057 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 6508141 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 8407522 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 8696808 12288950 ~ 12385042 (+)

Expression


Co-expression Network