AMCG00000801


Basic Information

Item Value
gene id AMCG00000801
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3650316 ~ 3650858 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000801
ATGCAATTTCTGGAGACTGTGACACGCGGCCTGATCGTCCTGTGCATCACAATGGCCATCGTGTTGTCCTCCATCGCGGTGTGCGACGGGCACTGGCTGCTCTCCGACGGGAAGATGTTTGGACTCTGGTACTTCTGCACCACAGAGGACGGCGCCCAGCCCAACTGCACCACTGACCTCACACAGGCGGCCATCGAGGGCCTCCCGGTGCGGCTCGTCTTCTGCAGGACCGTGGTGTCATTCGCGGTGGTGGCGGCCATCTTCGGCCTGGAGCTGCTGGTCATGTCGCAGGTGTGCGAGGGCCAGGACGCCAGGAGAAGGTGGGCCTTCGGGTCCGTGCTGGTCCTCCTCTCCGCCGTGCTGGCGGCCGCCGGGCTGCTGGGCTTCGTCCTGCTGCTGAGGAGCCAGGCCAGCCTCCTGGGCTTCACCCTGACCTTCTGGTGTCAGTTCACCGCAgtcttcctcctcttcatcaACGGGATGAGTGGGCATCACATCCACAACATGGTCCTGCTGCCCACGGGAGAGCGAGGAAAATACTAG

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000801 True 543 mRNA 0.63 1 3650316 3650858

Neighbor

gene id symbol gene type direction distance location
AMCG00000800 NA coding downstream 13072 3613564 ~ 3637244 (-)
AMCG00000803 NA coding downstream 38926 3594282 ~ 3611390 (-)
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding downstream 68131 3576437 ~ 3582185 (-)
AMCG00000795 NA coding downstream 81667 3545289 ~ 3568649 (-)
AMCG00000794 NA coding downstream 133106 3511119 ~ 3517210 (-)
AMCG00000802 NA coding upstream 11389 3662247 ~ 3667451 (-)
AMCG00000807 NA coding upstream 69555 3720413 ~ 3745555 (-)
AMCG00000811 insig2,LOC106582059 coding upstream 240165 3891023 ~ 3894951 (-)
AMCG00000809 htr5a,htr5ab,LOC107684958,LOC107550720 coding upstream 279419 3930277 ~ 3933300 (-)
AMCG00000810 ddx18,LOC107673737 coding upstream 283939 3934797 ~ 3941315 (-)
G126275 NA non-coding downstream 97339 3550840 ~ 3552977 (-)
G126037 NA non-coding downstream 1092067 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 1130096 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 1187828 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1822574 1822252 ~ 1827742 (-)
G126296 NA non-coding upstream 23423 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 593871 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 986509 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 987100 4637958 ~ 4638285 (-)
G126430 NA non-coding upstream 990200 4641058 ~ 4641341 (-)
G126096 NA other downstream 501064 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 509827 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 600300 3044167 ~ 3050016 (-)
G126089 NA other downstream 608352 3036931 ~ 3041964 (-)
G126017 NA other downstream 1192433 2451868 ~ 2457883 (-)
G126427 NA other upstream 985238 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1306280 4957138 ~ 4982651 (-)
G126700 NA other upstream 1921847 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3038710 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 3979057 7629915 ~ 7645722 (-)

Expression


Co-expression Network