AMCG00000803


Basic Information

Item Value
gene id AMCG00000803
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 3594282 ~ 3611390 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000803
AAAAAAGAGTCCGCAAGGGAGCAGCTCGACTCACAACAACGATGTGGCACCAGATCTTTAAAAAGCCAGCCAAGGAACCACAGCGACCATGAACTCGTCCTGCATGGTGGGGAAGGGTGTGCACCTGGACTGAAGACATTCACATCACTtgtatggattttgttttcttctgctcaGATCTCCCTCTGCGTCTATAGCCGACAGACCCGTCTGACGAGCTCCGGAGCCCCGAGGTTTCGGGAGCAGCAACATGAGACGGGCGCACGAGAAAGCCAGgaacggggtggggggggtgcatgCGTCCACCTCGGACCTCAGCGCTCACACCCCGCCGGACCTCCACAACGGGTACCAGGGGGCGACCCACAGAGGTCCTGCCAACCACCACGCCGCCGCCGCCCAGCTGGACCCCAACCCTGTCCTCAAGAGGGTGGAGGACGCCGCGGAGGGGCACCCGGGGGACAGCACCAACGCGGTCAACAAGGCTCTGATGGAGATCCTGCTGTACTTCGGCAGGGCTGTGCTGTTCCTGTTCCCGGTGTACATGACGGGCTACCTGGGGCTCAGCATCACCTGGGTGCTCTTCTGCCTGATGCTGGTCACCTGGTGGAGGAAGAACACGACGCGCAAGCGCGCCCGGCTGGACACGGCTTTCGACTTCTTGGAGAACGAGCGACTTGTCATCAACAAGGAGATCAAAGCCCTGAACATGCCTGCGtggGTCCATTTCCCAGATGTGGAAAGGGCCGACTGGCTGAACAAGATACTGCAGCAAGCCTGGCCTTACTTCGGGATTTACATGGAAAGGTTGTTGAAGGAGAAGATCCAGCCTTCAATCAGAACATCTAGTCACCATCTTAAGACCTTCACTTTCACCAAGGTCCATTTTGGACAAAAGCCCCTCAGGATAAACGGAGTGAAGTCGTACACAGACGAGGTGGACAAGAGACAAGTGATCTTGGATCTCAATTTGAGCTATGTCGGAGACTTGGACATTGTTGCCGCAGTGAAGAAACCCATCACAGCCGGGGTGCAGGGGGTGCAGCTTCATGGAGTCTTGCGTGTGATTCTGGAGCCACTGATTGGTCAGTCACCCCTGGTGGGTGGGATCACGATGTTCTTTATCCGTCGACCGaCTCTCGATATTGACTGGACTGGAGTAACAAATTTGCTGGACAGTCCAGCATTCAATAACCTCTCTGAGTCGGCCATCATGGATATCATCTCATCCTTCATGGTTCTGCCCAACCGCCTGTGCATCCCGCTCATTGACCAGGTGCAGATTGCACAGATGAGGTTCCCTCTTCCCCGGgggGTCGTCCGGGTTCACCTCATTGAGGCGCAGGATCTCATTGCCAGCGACTCCTACATGCTGGGGATGGTGAAAGGCAAGTCGGACCCCTACACCATCCTGAGGGTGGGCACTCAGAAGTTTAAGAGCAAAACGGTGAAGGAGAACCTGGACCCCCGATGGAATGAGGTTTTTGAGTTTGTTGTACATGAGGCCCCGGGGCAGGAGCTGGAGATAGAGGTGTTTGATGAGGACACGGATAAAGATGACTTTCTTGGCAGTCATCAGTTAGATCTTGGGGGAGTGATGAAGGACAGAGTTATTGATGAGTGGTATGAGCTGGATCAAGGCGACAGTGGAAAGATCCACTTGAAGCTGGAGTGGCTATCTCTAGTCCAGGACCAGGAGAAGCTGGTTGAGACCCAGAACGGCCGTGCCTGTGCCATGCTGGCTGTGTACCTAGACTGTGCTTCCAATCTACCGAAGAACACGACGGAGTACACTAACGACTTTGCAGGGAAGCATGGGAAACCAGGCAAGCCTGTAAAGGTCCCAAAAAAGAATATGGACCCCAACTCCTTTGTGGAATTGACTGTAGATCGGCAGATGCAGAAAAGCAAGGTTGCATACCTGTCCAAGGACCCTGTGTGGGAGCAGTGCTTCACGTTCTTTGTGCACAGTGTTAAGAACCAGCAGCTCAGTGTTGTGGTTAAAGACGTCGACAAGAAGGTCCCTCTGGGGCTGATGTCCCTGCCGTTCAACCGCCTGCTCACTGCCACCGACATGAGCATGGACCAGCGCTTCCAGCTGGAGCGCTCTGGCGCCAACAGCTCCATCAAGATGACAGCAACTCTCCGGATCTTGACCATCGAAAACCCACAGCCTAAGAAAGTGAACACCGACAACGGGAACAGGAAAGCCAGCGCTCAGGAGGCACTGGTGGCTGAGGTGAAACAGTCGAGCCCGGCGCTGCAGAAGCCCAGCCAGCAGCCCCCCGGCCCGGCGCTGCAGAGGCCCAGCGAACAGCCCCCCAGCCCGGTGCTGCAGACGCCCAGCGAGCAGCTCCCCTACCCAGGCCCCAGCGATGTCATGGAGGAGGGTGGACGGAGGTTTGTGGCCCTTCGACCCGACGGCCAATCGGAGAGCAAGCAAActgcccccaccacccccacgaGGAGGGACAGCACCCTCTACAGGCGATACGACTCCTCCAGCATGCTGTCGGAGTACTCCATGGCCTCCTCCCGCTATGACCTGACCGAGGGGGGCGCGCCCTACCCTCAGAATTTAGTCCCTTGCAGTGAAACCGGCACAGATGCCTACGTGCGGATCTATCTGCTTCCGGACCGGAGCTGGAGGAACAGAAAGAGAACTGCATACTCGGTGTCTCTGGAAGATGCCCAGAGACGGATGTTGGACGTGGCCGTGAAGAACAACAAAATGCTGCGCTCCAGGGAGAGGAAGGAAATCGGCACGgtCATGGTTGATCTCTCTCAGGAAGACTTGGTAAAAGGCTTCACATACTGGTACGAGCTGAGCTTGCCTGGACTCGGTAAATAAGCACGAAGAAAAGGTGAACGCAGCACCCATGAAAGAAACGTAAAGCCGTCTTTGCTGAAATGGACTtgtcttttatgtatttattattttgcccCCATGATTTGGTAATGTTTATTTATCTCACTTCTCCCATTTAAAGCCCGAATACTGAACTGGGTTTCCGCATCTTTCCTGGCACGCATCTAAAACATTACTGTTTTAGGAACACAACGAtcaggaatgtgttttttccccttttcatttcaatgcacAAAGAGAAGGATTAGAGAGATTTAACAAATACTGTCGGGTCAGCACTAAACCGTTTCTCTGTCATCTTTGCACAGGTGTGTCTAGTAGTTACATGCTGAGAACATTAGTAATGCTCCAGAGAGTGTAATATTCCTATCTCTTGTAATTTCTAGCATCTTTACGTATAAATCTTTGTtagatttatatttcaaatgtaatctgAAGTTCTCCACAGCTGTCTCTTCTAAAGTCCTCTAAATGCTGCAGTGCTCTATGGGGTAAACTAGGGGTTTCTCTACAGTGTCtcctgtatgtttgtatatattataaatatatatctgaatttatatttaaatacatttaggatatgaaaaagggaaaatgctGAGCTACAACATGTCTTTTTACGTGTATTTCTTAAACACGGCAATATTCCTGTTGAGGTCAGTATAAGAGTATCTTTTGCTAAATattgacatttgtttattttattttttggaaacgTTTCCCTTTTTGCATCTCTTTTTCAGCTTGATTTCGGTTTTTGTTAAATTAGGCTGGGGGCTAAAGACCATGCACTTCTCCACTAGTGCACTTTTGTCTTTTGGACCCAGTCAATCAGGTTAGCTTAACCTGAAAGGAACATCATTCACACTGTAAACTGCAGTTgttctttattaatttgttttcctttaaactGCACTCCATGTTAAGATGATGTCGATTCGACTCTTTGTCTGTCAGTTAAAAGGCAGACTGTGAAATggatacaattatttcaaatattcaatttaatgCACTTTTAAAGCACAATTATCAAATACATGATGAATATGAATTCAAACTAATAAACAAAAGCTGTATTTTGCTGATAATTAGTCCTGCATTAAGGTTGTGTAAATAAGgattcatttgtttaaaaagaaacagaaaaaatacagaagaccTAGCATGCTCGTGTTTGCATTAAGATTTTGTCagattttaataaagaaaagactAAACAGTCATAGACATATCTCTCCCCAAACCGGATGACCTGATTTATAATTTGGTTCATTCTTAATATTTGAAGTACAAaagaatgatttttttttttttacttaaaatatgtatatttttgcaCCCATGCTGTATAAACTTCAGTTGTGGAATTTTCTAATTGTATATAAGAGGTGTGTGGATACAAGgtattttaatactgtattattttatttctt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000803 True 4302 mRNA 0.48 22 3594282 3611390

Neighbor

gene id symbol gene type direction distance location
AMCG00000796 faima,LOC107723686,LOC107686598,LOC108425966,LOC108266416 coding downstream 12097 3576437 ~ 3582185 (-)
AMCG00000795 NA coding downstream 25633 3545289 ~ 3568649 (-)
AMCG00000794 NA coding downstream 77072 3511119 ~ 3517210 (-)
AMCG00000788 NA coding downstream 280157 3276258 ~ 3314125 (-)
AMCG00000784 NA coding downstream 356646 3233421 ~ 3237636 (-)
AMCG00000800 NA coding upstream 2174 3613564 ~ 3637244 (-)
AMCG00000801 NA coding upstream 38926 3650316 ~ 3650858 (-)
AMCG00000802 NA coding upstream 50857 3662247 ~ 3667451 (-)
AMCG00000807 NA coding upstream 109023 3720413 ~ 3745555 (-)
AMCG00000811 insig2,LOC106582059 coding upstream 279633 3891023 ~ 3894951 (-)
G126275 NA non-coding downstream 41305 3550840 ~ 3552977 (-)
G126037 NA non-coding downstream 1036033 2557991 ~ 2558249 (-)
G126005 NA non-coding downstream 1074062 2427941 ~ 2520220 (-)
G126020 NA non-coding downstream 1131794 2460715 ~ 2462488 (-)
G125875 NA non-coding downstream 1766540 1822252 ~ 1827742 (-)
G126296 NA non-coding upstream 62891 3674281 ~ 3676927 (-)
G126369 NA non-coding upstream 633339 4244729 ~ 4245041 (-)
G126428 NA non-coding upstream 1025977 4637367 ~ 4637640 (-)
G126429 NA non-coding upstream 1026568 4637958 ~ 4638285 (-)
G126430 NA non-coding upstream 1029668 4641058 ~ 4641341 (-)
G126096 NA other downstream 445030 3131714 ~ 3149252 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 453793 3133876 ~ 3140489 (-)
AMCG00000771 nabp1,nabp2,LOC106581684,LOC107718374,LOC106575791,LOC107557546 other downstream 544266 3044167 ~ 3050016 (-)
G126089 NA other downstream 552318 3036931 ~ 3041964 (-)
G126017 NA other downstream 1136399 2451868 ~ 2457883 (-)
G126427 NA other upstream 1024706 4636096 ~ 4636516 (-)
AMCG00000838 cacnb4,LOC108434427 other upstream 1345748 4957138 ~ 4982651 (-)
G126700 NA other upstream 1961315 5572705 ~ 5573027 (-)
AMCG00000888 LOC102209482 other upstream 3078178 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 4018525 7629915 ~ 7645722 (-)

Expression


Co-expression Network