Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000816 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 4299531 ~ 4306351 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000816 | True | 396 | mRNA | 0.63 | 3 | 4299531 | 4306351 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000812 | NA | coding | upstream | 251853 | 4002126 ~ 4047678 (+) |
| AMCG00000808 | ccdc93 | coding | upstream | 371371 | 3908654 ~ 3928160 (+) |
| AMCG00000805 | NA | coding | upstream | 536188 | 3762819 ~ 3763343 (+) |
| AMCG00000806 | c1ql2,LOC104939125,LOC102789465,LOC100698439 | coding | upstream | 600995 | 3686259 ~ 3698536 (+) |
| AMCG00000799 | NA | coding | upstream | 638993 | 3656867 ~ 3660538 (+) |
| AMCG00000814 | slc35f5,LOC106581698 | coding | downstream | 24017 | 4330368 ~ 4349297 (+) |
| AMCG00000815 | NA | coding | downstream | 45027 | 4351378 ~ 4366946 (+) |
| AMCG00000819 | NA | coding | downstream | 92235 | 4398586 ~ 4399059 (+) |
| AMCG00000823 | LOC104959882 | coding | downstream | 329941 | 4636292 ~ 4642779 (+) |
| AMCG00000822 | LOC106574436,LOC106575256 | coding | downstream | 345631 | 4651982 ~ 4667416 (+) |
| G126368 | NA | non-coding | upstream | 54495 | 4244732 ~ 4245036 (+) |
| G126301 | NA | non-coding | upstream | 569475 | 3725920 ~ 3730056 (+) |
| G126248 | NA | non-coding | upstream | 626355 | 3670802 ~ 3673176 (+) |
| G126240 | NA | non-coding | upstream | 642950 | 3652673 ~ 3656581 (+) |
| G126215 | NA | non-coding | upstream | 741107 | 3555566 ~ 3558424 (+) |
| G126500 | neb,LOC106518889,LOC106951376,LOC103134835 | non-coding | downstream | 570516 | 4876867 ~ 4880503 (+) |
| G126568 | NA | non-coding | downstream | 814694 | 5121045 ~ 5124330 (+) |
| G126569 | NA | non-coding | downstream | 820208 | 5126559 ~ 5126808 (+) |
| G126570 | NA | non-coding | downstream | 820963 | 5127314 ~ 5127656 (+) |
| G126572 | sec22a | non-coding | downstream | 822156 | 5128507 ~ 5130661 (+) |
| AMCG00000734 | NA | other | upstream | 2485374 | 1805407 ~ 1814157 (+) |
| AMCG00000729 | satb2,LOC107690605,LOC107569722 | other | upstream | 2600958 | 1668845 ~ 1698573 (+) |
| AMCG00000723 | crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 | other | upstream | 2693500 | 1599696 ~ 1606031 (+) |
| G125561 | NA | other | upstream | 3895940 | 339640 ~ 403591 (+) |
| AMCG00000848 | NA | other | downstream | 1154950 | 5461301 ~ 5465981 (+) |
| G127134 | NA | other | downstream | 4310848 | 8617199 ~ 8620195 (+) |
| AMCG00000949 | NA | other | downstream | 5793932 | 10100283 ~ 10154187 (+) |
| AMCG00001002 | myo3b | other | downstream | 7693313 | 11999664 ~ 12011425 (+) |
| AMCG00001022 | NA | other | downstream | 7982599 | 12288950 ~ 12385042 (+) |
