AMCG00000830



Basic Information


Item Value
gene id AMCG00000830
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 4708098 ~ 4708621 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00000830
ATGATTTTCTGCTTCCCCTCGGCTACCGAGGCATTATTTCGGATGAAAGCGTTGAGTGTCTTGAAGAGCGTGAACGTGGGTGAAGGAGGCGAGTTTGCAATGTCGTCAGCCTGTTTACCTTGGCCCGGGGCGATGCGAGTTCTCCTGAAGGAGCTGTTATTGAACTGCCTACGAACTGCCTCCTCTGTAGTACCTGAGGTCGATGGGCAGTTTGCACCCCTGACCTTCGCCCTGCGTCTCTTCTTCACCTTCAGCTCGGTTTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00000830 True 264 mRNA 0.54 2 4708098 4708621

Neighbor


gene id symbol gene type direction distance location
AMCG00000829 snx4,LOC107660619,LOC107741918,LOC107555933,LOC107673751,LOC107714137 coding upstream 4833 4684695 ~ 4703265 (+)
AMCG00000822 LOC106574436,LOC106575256 coding upstream 40682 4651982 ~ 4667416 (+)
AMCG00000823 LOC104959882 coding upstream 65319 4636292 ~ 4642779 (+)
AMCG00000819 NA coding upstream 309039 4398586 ~ 4399059 (+)
AMCG00000815 NA coding upstream 341152 4351378 ~ 4366946 (+)
AMCG00000828 NA coding downstream 2010 4710631 ~ 4720547 (+)
AMCG00000827 NA coding downstream 19955 4728576 ~ 4751344 (+)
AMCG00000826 NA coding downstream 44246 4752867 ~ 4772009 (+)
AMCG00000833 LOC106586391,LOC106582337 coding downstream 83488 4792109 ~ 4804342 (+)
AMCG00000834 itgb5,LOC106582337 coding downstream 110584 4819205 ~ 4823894 (+)
G126368 NA non-coding upstream 463062 4244732 ~ 4245036 (+)
G126301 NA non-coding upstream 978042 3725920 ~ 3730056 (+)
G126248 NA non-coding upstream 1034922 3670802 ~ 3673176 (+)
G126240 NA non-coding upstream 1051517 3652673 ~ 3656581 (+)
G126215 NA non-coding upstream 1149674 3555566 ~ 3558424 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding downstream 168246 4876867 ~ 4880503 (+)
G126568 NA non-coding downstream 412424 5121045 ~ 5124330 (+)
G126569 NA non-coding downstream 417938 5126559 ~ 5126808 (+)
G126570 NA non-coding downstream 418693 5127314 ~ 5127656 (+)
G126572 sec22a non-coding downstream 419886 5128507 ~ 5130661 (+)
AMCG00000734 NA other upstream 2893941 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 3009525 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 3102067 1599696 ~ 1606031 (+)
G125561 NA other upstream 4304507 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 752680 5461301 ~ 5465981 (+)
G127134 NA other downstream 3908578 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 5391662 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 7291043 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 7580329 12288950 ~ 12385042 (+)

Expression



Co-expression Network