AMCG00000841 (adcy5,LOC107555914,LOC107660638,LOC107661140)


Basic Information

Item Value
gene id AMCG00000841
gene name adcy5,LOC107555914,LOC107660638,LOC107661140
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5081856 ~ 5115984 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000841
ATGTCCATCAAACAGTTTCGCAGTCTATTTGGGGGCCCTGCTGAGATCATCTCGCCCTTTCAGCGCAGGGTCTTGTTACTGGTCTCCAATGTTCTCATCTTCTCCTGCACCAACATCGTGGGGGTGTGTACCCACTACCCTGCCGAGGGCTCCCAGAGACAGGCCTTCCAGGAGACCCGAGAGTGCATTCAGGCCCGACTCCACTCGCAGCGGGAGAACCAGCAACAGGAACGCCTCCTGCTCTCCGTCCTTCCCCGCCACGTTGCCATGGAGATGAAAGCTGACATTAATGCCAAGCAGGAGGATATGATGTTCCACAAGATTTACATCCAGAAACACGACAACGTGAGCATCCTCTTTGCAGACATTGAGGGATTCACCAGTCTGGCTTCACAATGCACGGCCCAGGAGCTGGTCATGACACTGAATGAGCTGTTTGCTAGATTTGACAAACTAGCCGCGGAGAACCACTGTTTACGTATCAAAATCCTTGGTGACTGCTACTACTGTGTGTCTGGGCTGCCGGAGGCCAGGGCCGACCACGCGCACTGCTGTGTGGAGATGGGAGTTGACATGATCGAGGCAATCTCGCTGGTGAGGGAGGTGACCGGGGTGAACGTGAACATGCGTGTCGGGATCCACAGCGGCCGCGTGCACTGCGGCGTCCTGGGGCTGCGCAAGTGGCAGTTCGACGTCTGGCGTATCCATATAACGGAGGCAACGCTGAACTACCTGAACGGGGATTACGACGTAGAGCCGGGCTTCGGGGGGGAGAGGAACGCCTACTTGAAGAAGCATAACATTGAAACCTACCTCATCGTTGGCTGCAGTCAAAAACGGAAGGAAGAGAAGGCCATGATAGCCAAGATGAACAGGCAGCGCACCAACTCGGTCACACACAACACGTCGCACTGGTGCTCTGACCGGCCCTTTTACAACCACCTGAGCGCCCACCAGGTCTCCAAGGAAATGAAGAGAATGGGCTTTGAGGATCCCAAGGACAAaaacacCCAAGAAAACATGAACCCGGAAGACGAGGTGGACGAGTTTTTGGGCCGCGCCATCGACGCCAGGAGCATCGACCGGCTGCGCTCTGAGCACGTGAAGAAGTTCCTCTTGACATTTAGGGAGCCAGACCTGgagaaaaagTACTCCAAGCAGGTGGATGACAGGTTTGGCGCGTATGTGGCCTGCGCTTCGCTCGTCTTCCTCTTCATCTGCTTCATACAGATCATTATTATGCCGCGCTCACCGCTGATGATTGGCTTTTACGTGACCTGTTTCCTCATCCTCCTGACTGTGATGTTTGTATCAGCAATCTACTCCTGCTTTAGGCTTTTTCCAGTGCCTCTGCAAACCCTCTCCAAGAAGATCGTCCAGTCCAGGACCAACAGCACCCTTGTCGGCATTTTCACAATCATCCTCGTCTTTCTCTCGGCATTCATCAACATGTTCACCTGCAGCACCAAGGGCCTCCACGTTTGCCTGGGCATCGAGTTCGACATCAGCGCCAGCTACGTGAACGCCTGTCACGTCCGCAGCTCCAGCTTCAACTACAGCCTTTACACGGTGGAGGGCTTCTGCGGGGGCATATCGCCCAACTGTAATTTCCCTGAGTATTTTACAGCATGCGTGTTGCTAAGCCTACTTGCCTGCTCTGTGTTCCTGCAAATCAGTAGCATTGGCAAGCTCATCCTCATGCTGTTTATCGAGTTGCTTTATGTCATCATTATAGAGGTCCCCGAAGTAAACCTCTTTGACAATGTGGACTTGCTGGTGACAGCCAATGCCATGCGTGACACTAATGTGACTTGTCCGGAGATTGATACCAAGGTCCCTCTGAAGATCATGACCCCAGTGGTAATGACTGTGTTTGTCCTGGCGCTGTACTTGCACGCCCAGCAGGTAGAATCCACTGCCCGGCTCGACTTCCTCTGGAAACTGCAGGCcacagaggagaaggaggaaatgGAGGAGCTCCAGGCCTACAACAGGAGGCTTCTCCACAACATCCTTCCCAAGGACGTGGCCGCCCACTTCCTGGCCCGTGAGCGGCGCAATGACGAGCTCTACTACCAGTCGTGCGAGTGCGTGGCCGTCATGTTCGCCTCCATCAGCAACTTCTCCGAGTTCTACGTGGAGTTGGAGGCCAACAACGAGGGCGTGGAGTGCCTGAGGCTGCTCAACGAGATCATCGCAGACTTCGATGAGGCaaggagaacaaaaaaatccttGACCAGCTCTCCTGAAGTGTTTCTTTTCCCCTTTGTTTTCTCCTCGCAGATTATCAGCGAGGACCAGTTCCGCCAACTGGAGAAAATCAAGACCATTGGCAGCACGTACATGGCTGCCTCGGGTCTCAACGACTCGACCTACGACAAGGCTGGGAAGACGCACATCAAAGCACTGGCGGACTATGCCATGAGGCTGATGGACCAAATGAAGTACATTAACGAGCACTCGTTCAAcaacttcaaaatgaaaatagGTCTCAACATTGGCCCAGTTGTGGCTGGAGTTATTGGGGCTCGAAAACCACAGTATGACATCTGGGGAAACACGGTGAATGTAGCCAGCCGGATGGACAGTACAGGTGTCCCTGAAAGAATACAGGTCACCACAGACATGTACCAGGTCCTGAGTGCCCATAACTACACGTTAGAGTGCCGAGGAGTGGTGAAGGTCAAGGGCAAAGGAGAGATGATGACCTATTTCCTGAACGAAGGCCCGCCGAGCAGTTAGCGCTACAGCAGTCTCgccagtctgtgtgtgtttttccatgttGTGCTCAGTGTGGGGACGGCTGACCTGGGGGCACTGCCCTCACCGCAGCGGGACCTCTGGGCCCCTGGACGACTGCCACAAACCCACCTTCAGGACACAACGCCACCGACCGCCCCGCATGTCCCTGTGCCGCCGGGGGTGTCGGATAGGAGAGAACCTGGCTGTGCCTCTTTGTGCCGCGGAGGAGAGCCAGGCAACCTGAAGAGACCAAAGAATTCTGACACTTGCTGCAACGAGTCACGGGAAAGACAGACTGAGGACTGTCAAGACGTTCAATTACTAGATTCTGCAAAGGAGAGGAAATCAATAATCCAAGACTTACAAAACTAACGGTGAAGTAAAATACCTTACAAGGGTCCGGGATGGAGTGTCTCAGTGTTTTTGCATATTCTCTCAAGCATATTCTGTGGTGAAGGAGCCAAGTTCTCAACAGGAGTCTGTGTGAAGATGCTGCCTGTTGACTACAACTTATTTCTAATACATATGAATatgaaacataaatatatgtataagtatgtgtgtgtgtgtgtgtgtgt

Function

symbol description
adcy5 Predicted to enable adenylate cyclase activity. Acts upstream of or within regulation of protein phosphorylation and response to ethanol. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Is expressed in brain; head; and heart. Orthologous to human ADCY5 (adenylate cyclase 5).

NR:

description
PREDICTED: adenylate cyclase type 5 isoform X3

GO:

id name namespace
GO:0045471 response to ethanol biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0001932 regulation of protein phosphorylation biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004016 adenylate cyclase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K08045 ADCY5; adenylate cyclase 5

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000841 True 3320 mRNA 0.53 21 5081856 5115984

Neighbor

gene id symbol gene type direction distance location
AMCG00000840 LOC107714401,LOC107596066,LOC107661140,LOC107555914,LOC107741932,LOC107660638 coding upstream 33772 5039948 ~ 5048084 (+)
AMCG00000837 LOC107580446 coding upstream 47159 5025295 ~ 5034697 (+)
AMCG00000832 NA coding upstream 218008 4844092 ~ 4863848 (+)
AMCG00000831 tnfaip6 coding upstream 242976 4833357 ~ 4838880 (+)
AMCG00000834 itgb5,LOC106582337 coding upstream 257962 4819205 ~ 4823894 (+)
AMCG00000844 NA coding downstream 106013 5221997 ~ 5265705 (+)
AMCG00000845 NA coding downstream 200213 5316197 ~ 5332706 (+)
AMCG00000849 NA coding downstream 281341 5397325 ~ 5404570 (+)
AMCG00000847 NA coding downstream 310177 5426161 ~ 5441254 (+)
AMCG00000857 NA coding downstream 357110 5473094 ~ 5487499 (+)
G126500 neb,LOC106518889,LOC106951376,LOC103134835 non-coding upstream 201353 4876867 ~ 4880503 (+)
G126368 NA non-coding upstream 836820 4244732 ~ 4245036 (+)
G126301 NA non-coding upstream 1351800 3725920 ~ 3730056 (+)
G126248 NA non-coding upstream 1408680 3670802 ~ 3673176 (+)
G126240 NA non-coding upstream 1425275 3652673 ~ 3656581 (+)
G126568 NA non-coding downstream 5061 5121045 ~ 5124330 (+)
G126569 NA non-coding downstream 10575 5126559 ~ 5126808 (+)
G126570 NA non-coding downstream 11330 5127314 ~ 5127656 (+)
G126572 sec22a non-coding downstream 12523 5128507 ~ 5130661 (+)
G126573 NA non-coding downstream 15734 5131718 ~ 5131991 (+)
AMCG00000734 NA other upstream 3267699 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 3383283 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 3475825 1599696 ~ 1606031 (+)
G125561 NA other upstream 4678265 339640 ~ 403591 (+)
AMCG00000848 NA other downstream 345317 5461301 ~ 5465981 (+)
G127134 NA other downstream 3501215 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 4984299 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 6883680 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 7172966 12288950 ~ 12385042 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location