Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000862 |
| gene name | LOC107551943,LOC108430494,LOC107663912,LOC107733654 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 5939611 ~ 5949304 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: ras-related protein M-Ras-like isoform X1 |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0006184 | obsolete GTP catabolic process | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0003924 | GTPase activity | molecular_function |
| GO:0005525 | GTP binding | molecular_function |
| id | description |
|---|---|
| K07831 | MRAS; Ras-related protein M-Ras |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000862 | True | 1379 | mRNA | 0.46 | 6 | 5939611 | 5949304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000859 | NA | coding | upstream | 114968 | 5817121 ~ 5824643 (+) |
| AMCG00000856 | NA | coding | upstream | 371230 | 5557451 ~ 5568381 (+) |
| AMCG00000855 | clasp1 | coding | upstream | 382942 | 5497622 ~ 5556669 (+) |
| AMCG00000857 | NA | coding | upstream | 452112 | 5473094 ~ 5487499 (+) |
| AMCG00000847 | NA | coding | upstream | 498357 | 5426161 ~ 5441254 (+) |
| AMCG00000868 | mgat5,LOC103369129,LOC106575089 | coding | downstream | 134687 | 6083991 ~ 6120281 (+) |
| AMCG00000867 | acmsd,LOC107555338,LOC107723660 | coding | downstream | 232601 | 6181905 ~ 6189062 (+) |
| AMCG00000872 | NA | coding | downstream | 240666 | 6189970 ~ 6193791 (+) |
| AMCG00000869 | NA | coding | downstream | 244754 | 6194058 ~ 6198523 (+) |
| AMCG00000871 | NA | coding | downstream | 269076 | 6218380 ~ 6221405 (+) |
| G126714 | NA | non-coding | upstream | 139976 | 5719268 ~ 5799635 (+) |
| G126697 | NA | non-coding | upstream | 367679 | 5569970 ~ 5571932 (+) |
| G126667 | NA | non-coding | upstream | 472083 | 5466982 ~ 5467528 (+) |
| G126621 | NA | non-coding | upstream | 589369 | 5349982 ~ 5350242 (+) |
| G126574 | NA | non-coding | upstream | 806655 | 5132374 ~ 5132956 (+) |
| G126781 | map3k19,LOC106586307 | non-coding | downstream | 251605 | 6200909 ~ 6201605 (+) |
| G126782 | NA | non-coding | downstream | 254394 | 6203698 ~ 6206033 (+) |
| G126805 | NA | non-coding | downstream | 263878 | 6213182 ~ 6213407 (+) |
| G126886 | NA | non-coding | downstream | 431670 | 6380974 ~ 6381195 (+) |
| G126919 | epc2,LOC106586324 | non-coding | downstream | 724308 | 6673612 ~ 6674227 (+) |
| AMCG00000848 | NA | other | upstream | 473630 | 5461301 ~ 5465981 (+) |
| AMCG00000734 | NA | other | upstream | 4125454 | 1805407 ~ 1814157 (+) |
| AMCG00000729 | satb2,LOC107690605,LOC107569722 | other | upstream | 4241038 | 1668845 ~ 1698573 (+) |
| AMCG00000723 | crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 | other | upstream | 4333580 | 1599696 ~ 1606031 (+) |
| G125561 | NA | other | upstream | 5536020 | 339640 ~ 403591 (+) |
| G127134 | NA | other | downstream | 2667895 | 8617199 ~ 8620195 (+) |
| AMCG00000949 | NA | other | downstream | 4150979 | 10100283 ~ 10154187 (+) |
| AMCG00001002 | myo3b | other | downstream | 6050360 | 11999664 ~ 12011425 (+) |
| AMCG00001022 | NA | other | downstream | 6339646 | 12288950 ~ 12385042 (+) |
| AMCG00001098 | NA | other | downstream | 9200971 | 15150275 ~ 15184392 (+) |
