AMCG00000865


Basic Information

Item Value
gene id AMCG00000865
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5922771 ~ 5923706 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000865
ATGGCGTTGCCCTTCACCAGGAAACTCACAATATTTGTACAGAAGTACAGGACAGGGCTGCTGGTCACTTCCTGTGCGGGAGTCTTCTCGGTCAACATGTTTTACCATGCTTTTCCAGAACAGACTTATAAGAAGCTGTACCAAGCCTGGAGCAAAGGAGAGCCGGCCGTCCTGTCTGAGAAACTGCAGAAGACCTTCCAGGAGGTCCTCCAGGACACAGGAGTCCGCCTGCCCCGGAAATACACGGCCTTTGCTGCTTTTGGTTTCCATCCCGTGGGCGCCGGCCAGCCTTGGATGCCGCTGGGAGCTCAGATCGGCATCCCGGCCAACTTCAACAGCACCACGGATGACACCGAGGGCATCACCAACCGAGTCATTTTGATAAATGGCAAGGAATTGCACTGGGACAGCAGCACGGGCAAGGCACTGAAAGAGTCGTTGACGTTCTCCCCCGAGGCCCAGCAGTTTGCCGTTGCCAGAGAAGTCGTTCGTTTGAAGAGTGGCGGCCCTCTTCTCCTGGCAGCTGTGGCGCCCACCTGCTTGGCTGGCACCTGCCTCTTTGGGGTGGCTGTCAAGCAAATGTTCACCTTATACAGCGGCCCTGTGATGCTGCGAGGACTTGTGAATGTCGCCGTGCTGGCCCTCGGGTCTGCTTTCTACTTTCTGACATCTGACGCAGTGACCCAGTGGCTTGACTACAAGTCAGACCGCACGGCAGCTCGCCTCTCCAAAGACTACGCCAGGGGAGGAGTGGAGTTTTATGATAAAATTCTGTCTCGAAACGTTACCCTTCGTGGTCTGATGGGTAAAAAGGGAGAGGAGATGTATACTCCAAGCGGCAACTTGTTTCCGACGCACTGGTTCAGATTAAAGCACGCTCCGTACACCGCCAGGAGAGAAGGCATTGTGAAACTTTTGAATGAACAGAAGGTGTAG

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000865 True 936 mRNA 0.55 1 5922771 5923706

Neighbor

gene id symbol gene type direction distance location
AMCG00000863 NA coding downstream 30017 5860845 ~ 5892754 (-)
AMCG00000864 NA coding downstream 66484 5822538 ~ 5856287 (-)
AMCG00000861 ralba,ralb,LOC107746258,LOC107597482 coding downstream 110889 5799381 ~ 5811882 (-)
AMCG00000860 inhbb,LOC106575190,LOC108411664,LOC106574263,LOC105019970,LOC108270543 coding downstream 132992 5782352 ~ 5789779 (-)
AMCG00000858 NA coding downstream 283530 5599949 ~ 5639241 (-)
AMCG00000866 NA coding upstream 61398 5985104 ~ 6010417 (-)
AMCG00000875 LOC107725256,LOC103367750,LOC106582396,LOC107684456 coding upstream 203713 6127419 ~ 6142577 (-)
AMCG00000874 NA coding upstream 274885 6198591 ~ 6211393 (-)
AMCG00000873 LOC107710929 coding upstream 330194 6253900 ~ 6289579 (-)
AMCG00000880 NA coding upstream 416646 6340352 ~ 6356387 (-)
G126698 NA non-coding downstream 350638 5569944 ~ 5572133 (-)
G126665 NA non-coding downstream 458719 5462567 ~ 5464052 (-)
G126631 NA non-coding downstream 550312 5372249 ~ 5372459 (-)
G126563 NA non-coding downstream 803735 5116054 ~ 5119036 (-)
G126554 NA non-coding downstream 888074 5013868 ~ 5034697 (-)
G126767 NA non-coding upstream 19680 5943386 ~ 5949894 (-)
G126873 NA non-coding upstream 411007 6334713 ~ 6335866 (-)
G126887 NA non-coding upstream 457257 6380963 ~ 6381248 (-)
G126977 NA non-coding upstream 1196538 7120244 ~ 7125041 (-)
G127145 NA non-coding upstream 2714890 8638596 ~ 8639883 (-)
G126700 NA other downstream 349744 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 940120 4957138 ~ 4982651 (-)
G126427 NA other downstream 1286255 4636096 ~ 4636516 (-)
AMCG00000804 NA other downstream 2266210 3553047 ~ 3656561 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 2782282 3133876 ~ 3140489 (-)
AMCG00000888 LOC102209482 other upstream 765862 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 1706209 7629915 ~ 7645722 (-)
G127292 NA other upstream 3495290 9418996 ~ 9419325 (-)
G127443 NA other upstream 4350981 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 4773150 10696856 ~ 10700364 (-)

Expression


Co-expression Network