AMCG00000866


Basic Information

Item Value
gene id AMCG00000866
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 5985104 ~ 6010417 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000866
ATGAAGACGCCCTTCATGTGGAAACTTGCCAAAGTACTTTGGTGCTGCATAAGTGCATTAGTGGACGCACAGATTGGTTCGGATGAAGGGATCACGAAAGAGGAGCAAATTTACCTTGTTGTTGACGCCAAGCTGCAGTGTGACCTGAATATATCAGCCCAGGAATCTGGAGGTGATTTGTGTCCACCTGACTGGGACGGGGTGATCTGCTGGCCTCGGGGCTCTCCTGGAGTGCTCACCAAAGTCCCCTGCCCAACCTACATCTATGACTTCAATCACAATGGGCATGCTTACAGGAAGTGTGACTTAAATGGTTCATGGCACTTTGTGGAAAGCTTGAACCGGACATGGTCCAATTATTCGGAGTGCTTAACATTTCTTCACCCAGACTCTGAAGGTGGGAAATTGGATTTCTTTGAGCGTCTGTATGTCATGTACACAGTCGGATACGCAGTGTCATTCAGCTCTCTGCTTGTTGCCATTTTCATCATTGGCTACTTCAGGAGACTGCACTGCACCAGAAACTATATCCACATGCACTTGTTTGTGTCGTTCATGCTGCGTGCTATCAGCATTTTTGTGAAAGACAAGGTCGTCCATGCCAGTATGCATCGACAAGACTACGACTCTGCGATAATGGACAGCTTTAAGACAATTCCAATGGCTCCTCCTGTGGACCCATCTCAATATATTACGGTTCTGCTCTTCATCTATTTCCTGGCGACCAACTATTACTGGATTCTGGTGGAAGGACTTTACCTCCACAGCCTCATCTTCATGGCGTTTTTCTCTGATACCAAGTACCTGTGGGGATTCACTTTGATTGGATGGGGTGTTCCGGCTCTCTTTGTAGCAGCATGGGCAGTTGTCAGGGCAACACTTGCAGATGCCAGATGCTGGGAACTCAGTGCTGGAAACATTAAATGGATCTATCAAGTTCCAATTTTGACAGCTATTGGTCTGAATTTCATCTTGTTTGTAAACATCGTCAGAGTCCTAGCAACAAAGATCCGGGAGACGAATGCAGGAAGATATGACACAAGGAAACAATACAGGAAGCTGGCCAAATCCAccctggtgctggtgctggtttTTGGGGTTCACTATATAGTCTTCGTGGGAATGCCGCACACCTTCAAAGGCATAGGGTGGGAAGTGCGGATGTACTTTGAACTCTTCTTCAATTCTTTCCAGGGATTTTTTGTGTCCATCATTTATTGCTACTGCAATGGAGAGGTTCAGACGGAAATCAAGAAGACATGGTCCCGCTGGAACCTGGCCTTTGACTGGAAGAAGACCACGCAGTGCAGCAGCTACCGCTACGGCTCCGTCCTCACCAACCTCAACAACAGCACCAGCAGCCAGTCGCAGCTGGCCAGCACCTCGCGCACCGCGCTCTTCTCCAGCCGTGTGTACCGCAGTGGCGCCAAGAACGTCAGCAGCCACACCACCCTGCCCGGCTACGTCATCAGCAACTCGGACCCCGACAGCCTGCCACCCTCCATCCCCGAGGAGCAGGACGAGAGCGAAGAGAAGCAGGTGGACGACATCTCGCTGAAGGAGTCGCTGCAGCCCATGCTCCATCGCAGCGTGGGGGAGGACGACGAAGAAACATTATag

Function

GO: NA

KEGG:

id description
K04586 PTHR2; parathyroid hormone receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000866 True 1620 mRNA 0.50 13 5985104 6010417

Neighbor

gene id symbol gene type direction distance location
AMCG00000865 NA coding downstream 61398 5922771 ~ 5923706 (-)
AMCG00000863 NA coding downstream 92350 5860845 ~ 5892754 (-)
AMCG00000864 NA coding downstream 128817 5822538 ~ 5856287 (-)
AMCG00000861 ralba,ralb,LOC107746258,LOC107597482 coding downstream 173222 5799381 ~ 5811882 (-)
AMCG00000860 inhbb,LOC106575190,LOC108411664,LOC106574263,LOC105019970,LOC108270543 coding downstream 195325 5782352 ~ 5789779 (-)
AMCG00000875 LOC107725256,LOC103367750,LOC106582396,LOC107684456 coding upstream 117002 6127419 ~ 6142577 (-)
AMCG00000874 NA coding upstream 188174 6198591 ~ 6211393 (-)
AMCG00000873 LOC107710929 coding upstream 243483 6253900 ~ 6289579 (-)
AMCG00000880 NA coding upstream 329935 6340352 ~ 6356387 (-)
AMCG00000883 NA coding upstream 540595 6551012 ~ 6556951 (-)
G126767 NA non-coding downstream 35210 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 412971 5569944 ~ 5572133 (-)
G126665 NA non-coding downstream 521052 5462567 ~ 5464052 (-)
G126631 NA non-coding downstream 612645 5372249 ~ 5372459 (-)
G126563 NA non-coding downstream 866068 5116054 ~ 5119036 (-)
G126873 NA non-coding upstream 324296 6334713 ~ 6335866 (-)
G126887 NA non-coding upstream 370546 6380963 ~ 6381248 (-)
G126977 NA non-coding upstream 1109827 7120244 ~ 7125041 (-)
G127145 NA non-coding upstream 2628179 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 2753696 8764113 ~ 8764392 (-)
G126700 NA other downstream 412077 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 1002453 4957138 ~ 4982651 (-)
G126427 NA other downstream 1348588 4636096 ~ 4636516 (-)
AMCG00000804 NA other downstream 2328543 3553047 ~ 3656561 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 2844615 3133876 ~ 3140489 (-)
AMCG00000888 LOC102209482 other upstream 679151 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 1619498 7629915 ~ 7645722 (-)
G127292 NA other upstream 3408579 9418996 ~ 9419325 (-)
G127443 NA other upstream 4264270 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 4686439 10696856 ~ 10700364 (-)

Expression


Co-expression Network