AMCG00000876


Basic Information

Item Value
gene id AMCG00000876
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 6362207 ~ 6365270 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000876
GTCTGCGTCACTACAATACCCAGAACCGCCGTGTTGCCAGGGTCACAGACAGCATCTGAAGAAGGAAGTAGTTGTACTTTAACGGATTTtatgtattcttattttaaaggaaaatacttttcaaagcttttcagaATCAGGAAGACACTGGCAACACTCGTGCCAGTAATCAGTCCTCAATGACGGCAGACAGCGCCGCAGCCCGGGCCGTGGTGGTGTCCGGGGTCCCGGAGGGGCTGCTGGACTGCGGCACCATGGCGGACAAGCTGGTCATCCACTTCCAAAGAGCCAGGAGCGGAGGCGGGGACGTGGCGGCCATCCAGTACCCCACATCCTTCAGGGGTGTCGCCTTCGTCATGTTTGAAGAGCAGAAAGATGCAGCCCGGGTTCTGCAAGTGCAACAGGTGCTGCAAGATGAAGCATTGCCAAAGGGCTATCCTCTGACCGTGTTTCAGTTCACTCAGGATGTGTTTTGCTATGCGTTCGCAGAAGTGGACTTCTCCCTGTTCAGTGATCATGAGCGGCTGATCGAGGATCTTCAGGCGACACACCGCTGTGTCAGGATCTCCTCTCTGCAGCCACACGGCAGGGCTCTGCTGGAGGGGCCCTTCAAAGCCTTGAAGGAAGTGAGGGAAGCGCTCTTAAGAGCTGGTGGGTATGAGAGTCCTCTCGGCAGCAGAGAGGTTCAGCTAAGCCCAGAGAGGTCGGGGAAACCGTCAGTAATGGACCCCCCCGGCCAACGGGAGTGCTCGGTTTGGGTGGATACCAACGTGTTCAGGTACATTCAGCATTTCAGGCAGGAAGACTTTGATCTGTGTTTGCGTAAGTATGACGTCGCGCCTGCCATAGAGGTGCAAGGAGAGGTGACCAAAGTTACTCTGAGCACCAAAGGGCAGCCTTGTGTCGGAGCCCAGGCAGAGCTTGAGCTGCTGATCGCCGGCCTGCAGCCGCGTCTGAGGACTCAGATCATCCAGCACACCAGTGACGACCGACGCCAGCGGGAGGAGCTGTTACGGATCTGTAAGGAATCGAACCACATTCATGACACGGTTCTTATCATTCCGTCAGAAGCTCATATTGAGATCGTCGGCCCGTCTTCCAGCTGTTTCTTGTTCTGTCAGATGGTCGAGGGCAAACTGAAGGCTGCATCCGCTGACGGTTCAGACACGGCTTTGGGTGCAGccgcctcctccagctcctatAACACGGGGCGACTAAGAGAGCCATATTCTCTCCGCAGTGGACCAATGGACCCGATCCGTAGCCCAGAATACCATTGAACTGTTGAAAACCTACCCAGGAAGCCAACTAAACAAAGAATTATATTGTACATACTTATGTACACACAATTAATCGGGTTGATAATGATctgaatatttgaaataatgtatgtagTTCAATGAGCAGAATGAAGACGTGCTTTATTGACTAAATATTACTGACGTTCACTTGACGACTTTTGCTTATCAGTTCATACTTGCTGGAAAAGCCAGaatgtttgttcattatttatcaaCTTAGTAGTTcgtcaaaaatacaaattcccGCACATTTCTACACAAACCTGTACAATAGTTGTGTTATGGATGGTTTTGCAAACAATTGAGGTGTATAGGaatgtttatttacacttttctggttaaatgatttttttaattaaaggtttgttgtacattttctgACAGCTAAACATAGTTACAGTATAACCCACAGTGCAGGACccaatttacttttttgttcttATATTTACAATCTTGCCTAGTTTGTATTTGCTTCATAGTGTTAAAAAAgattatttactgttttagAATAATGCTAAACATGATTCTATTATATCTGTATCTCCTTTGATAGGATTGGTATTGTAGTACTGGATATCTGTTCCAAACAAATAATCTTTCATCAATGTCCTAGCATTTGGgctgaaaagcaattaaaatattgattggATTTATACGTGTAAAAAAGATTTGTGGAAGCAAATAAAGACAATGGATGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000876 True 2000 mRNA 0.46 4 6362207 6365270

Neighbor

gene id symbol gene type direction distance location
AMCG00000879 NA coding upstream 1182 6357094 ~ 6361025 (+)
AMCG00000877 NA coding upstream 22173 6334748 ~ 6340034 (+)
AMCG00000878 NA coding upstream 30107 6305017 ~ 6332100 (+)
AMCG00000870 rab3gap1,LOC106586310 coding upstream 109437 6232529 ~ 6252770 (+)
AMCG00000871 NA coding upstream 140802 6218380 ~ 6221405 (+)
AMCG00000881 rnd3,LOC108425727 coding downstream 53612 6418882 ~ 6426938 (+)
AMCG00000882 NA coding downstream 166731 6532001 ~ 6541611 (+)
AMCG00000884 orc4,LOC107577955 coding downstream 368537 6733807 ~ 6743970 (+)
AMCG00000890 NA coding downstream 923013 7288283 ~ 7307656 (+)
AMCG00000891 NA coding downstream 978600 7343870 ~ 7346591 (+)
G126805 NA non-coding upstream 148800 6213182 ~ 6213407 (+)
G126782 NA non-coding upstream 156174 6203698 ~ 6206033 (+)
G126781 map3k19,LOC106586307 non-coding upstream 160602 6200909 ~ 6201605 (+)
G126714 NA non-coding upstream 562572 5719268 ~ 5799635 (+)
G126697 NA non-coding upstream 790275 5569970 ~ 5571932 (+)
G126886 NA non-coding downstream 15704 6380974 ~ 6381195 (+)
G126919 epc2,LOC106586324 non-coding downstream 308342 6673612 ~ 6674227 (+)
G126898 NA non-coding downstream 320159 6685429 ~ 6748609 (+)
G126982 NA non-coding downstream 866083 7231353 ~ 7254142 (+)
G127033 NA non-coding downstream 1244347 7609617 ~ 7613856 (+)
AMCG00000848 NA other upstream 896226 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 4548050 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 4663634 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 4756176 1599696 ~ 1606031 (+)
G125561 NA other upstream 5958616 339640 ~ 403591 (+)
G127134 NA other downstream 2251929 8617199 ~ 8620195 (+)
AMCG00000949 NA other downstream 3735013 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 5634394 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 5923680 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 8785005 15150275 ~ 15184392 (+)

Expression


Co-expression Network