AMCG00000883


Basic Information

Item Value
gene id AMCG00000883
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 6551012 ~ 6556951 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000883
tttaggtACCTATCAGTGGGGAAGGAGTTAGCCAATTAGAGAGCTGCATGTGTGAGGCCACGCCCAGCAATGGAACCCTGGCCTACAGTGGCCTGGGTCCTACTGCTGAGCATCATCACTGATTGGCTGAGAACTGTCCACTCACGTGACTTCACATTCAGAGACATCATCTACCTCCACCCTTCAAAAACAAGATACTgtttcacacaacacacaatggACTCCCGAGGGGAAAGCGTGTCGGTCACTAAGCGCTGCGTACCACTGGAGGACTGTCTGTCCACAGGATGCATACAGCTTAATCCTGAAGGACATAAGGTTTGTACCTCATGCTGTGAAGGAACCATCTGCAACATGCCTTTGCCAAACAACGAGACCGATGCCATCTTTGCCACCACGTCTCCCCTCAACAAAACAACCAAGCTTGTACAGAACCGCTTCCTAATGACTGGAATAGTTGGTGTCAGCATCATTCTTTTCATGCTTGCGTAACATTCGGATtaaatttaaagcaaatgtgAAACTGACTATATTTATACTCCATCATGGGCCAGATTTAATATAAAAGTATGAAAATATAACATTGTTCGTTATGAATTATCTACAATATGACAACCCCTCTCGGCAGCACAAGTATACCCCAGTGCAGCTTTTGATGTCTTTTAGGATAGTTAAATCCCTTTTTGCTCATGTTATCCAGTCTAGAACATGGaagtcatttttgtttattcatattttgagatattttgAGTTTTGCCTCTTTATGTTGTCTTTGTTTGTATATGTTGTGTACAGTAtacatagtatttatttttgtataatacactagaaaatttaaaatgttagatAAACATTAACCAGTTAAGATACAGCATATAACTTTCCATTTCGATTTTCCGGatgggaattattattttacatgtcatGCAAAAGGCATAACCTCTGGATTGTACTTTGTATGTATTGAATGTGTTCTTCTGCAAagcaaagaataaaaatgacagcttcaaCATTCCCGTTAGAAGATAAATGAATAGAATGTAAGTCACTGAACAGCAAGAAAGAGAAATGGACAAATCTACTGCATTAATACCATGTGCTTGGACATTTATACTAAACActtttttgattaaatatttaatgtgcaCATGATTTACAAAAAGATGTCTGTATAAGCTTGTCTGAGATCTGTTCAAACACTTAATACTGACTTTGCAAATATGTTATCTCTTAGGAAAGCTTTTAAGTTGTTCTGGGCTGCTTGCCCACAAATGTAGTATACTTGATTGCTGGTCAATTGTTCTGCAAAACTTACTTCTGTCTGATATGATGTAAGATAGTCATAATCTTATGACCTTAAAGTTAATCTAAAAACCACGATGTGTATGCTTTCAGTCACTTCTAATTCTGGAAATGTCAACTTTGCAAATAGTTTGACTatgatttctttgtttatttaaattaaataatggaataCATGACATGCGTTTACTAATAAACATTTCAAGACATATCATACAATGTACActgtcaaatgtaaatataaagtttTAAGTATGAATATTACAGTGCTGCCTGTTTGCATTTCATGCAGTTcagtaaaaatacttttaaaaagtgcatgTTGGATCTAACTAGATAAACAGTATGCATATGttcaaaactgtaaataaagtagatttttttttgtatgtattatttatgtaaatattgtaaagcTGTGAATATACATTGACACTTCATATTAAAACATACTGA

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000883 True 1758 mRNA 0.35 3 6551012 6556951

Neighbor

gene id symbol gene type direction distance location
AMCG00000880 NA coding downstream 194625 6340352 ~ 6356387 (-)
AMCG00000873 LOC107710929 coding downstream 261433 6253900 ~ 6289579 (-)
AMCG00000874 NA coding downstream 339619 6198591 ~ 6211393 (-)
AMCG00000875 LOC107725256,LOC103367750,LOC106582396,LOC107684456 coding downstream 408435 6127419 ~ 6142577 (-)
AMCG00000866 NA coding downstream 540595 5985104 ~ 6010417 (-)
AMCG00000886 NA coding upstream 41901 6598852 ~ 6601477 (-)
AMCG00000887 LOC105022551,LOC103370269 coding upstream 67306 6624257 ~ 6662496 (-)
AMCG00000885 NA coding upstream 108351 6665302 ~ 6678106 (-)
AMCG00000889 acvr2a,LOC103040899,LOC105016248,LOC106586327 coding upstream 191376 6748327 ~ 6752464 (-)
AMCG00000898 NA coding upstream 814969 7371920 ~ 7454374 (-)
G126887 NA non-coding downstream 169764 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 215146 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 601118 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 978879 5569944 ~ 5572133 (-)
G126665 NA non-coding downstream 1086960 5462567 ~ 5464052 (-)
G126977 NA non-coding upstream 563293 7120244 ~ 7125041 (-)
G127145 NA non-coding upstream 2081645 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 2207162 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 2509889 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 2801397 9358348 ~ 9360596 (-)
G126700 NA other downstream 977985 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 1568361 4957138 ~ 4982651 (-)
G126427 NA other downstream 1914496 4636096 ~ 4636516 (-)
AMCG00000804 NA other downstream 2894451 3553047 ~ 3656561 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 3410523 3133876 ~ 3140489 (-)
AMCG00000888 LOC102209482 other upstream 132617 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 1072964 7629915 ~ 7645722 (-)
G127292 NA other upstream 2862045 9418996 ~ 9419325 (-)
G127443 NA other upstream 3717736 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 4139905 10696856 ~ 10700364 (-)

Expression


Co-expression Network