AMCG00000886


Basic Information

Item Value
gene id AMCG00000886
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 6598852 ~ 6601477 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000886
CCTCCGTAGATGTGCTAATTTGTCCATTTCTGTGCCTTCTTTTCTTCAAGGTATTGGTTTGCCCGTCTGTCTCCAGTATGGTGGTCCTCACAGCCCCCCACCACTCGGTGCTCCTTCAGGTCCTCTTGCTTGTAGCCATGTGTGATGATGGGGCTGCAAGAAACGTCAACTTCTACAATGTGAGACCACCTGTAGATCccACCCCTTTTCCAAACAGCATCAAATGCTTCACCTGTGACCACGCTGCGGACAATTACAACTGCAACCGCTGGGCTGAAGATAAGTGGTGCCCCCAGAATACGAAGGTCTGTATGACAGTCCATCACTTTACCGGCCATGGGAGGAGCAAGTCCGTGACAAAGAAGTGTGCTGCGAGGGAGGAGTGTCACGCGGTAGGATGCCGACACCACAGGGATACAGGACATACAGAGTGTGTCTCTTGTTGTGAGGGAATGGTCTGTAATGTTGAGGCCCCAACGAACCACACCAACGCAGTGTTCGCGATGATGCAGTCCCGTAGTTCATCAGCTCCCAGCGTTTGGACCTGGAGGTTTACAGCTGTCCCTGTTGCGATTGTTACAGTGCTGTTGCTGTCTTGACAGTAAGGACTCATTCAGTCCAGTTCAATTCTGAGAGACTCAGGAGCTCCGTAACATACAAGAAGAAACGTCACGATGAAGGTGAATGTTGtgtatgttaatgagggaagGACTTGAATCAGTCTGCaagataaaataacatttgtgcaAACATTTGCTCTGAAGACTGGAGATGGGTGTTTATGCAACAAATAACACTTATTTTTATAGCAACTTATTTATATGACCTCATCGAGTTCATACATCGATCAGTGACTTGCCTCTTCAAGGATGTACTACAGGATACATATGTGAAAAGTGGATCATTGTAATACGTGTTGGTAAGTACGAAGTGGTCAAGGACGGAAAACAACACGACGCTACGGAGCACCGTAAGAGTGGAGTTACATTCATTTCTTTACAGAACCTTTCAGCACTTTCATTGTGATGTTACTAACAGTGTAAGTTATTTTGTACAAGTCTGAATGGCCAGATTAACAATGTTCTGGACTGGAGAATTACAATAGAAAACATTGCTGTTGCTGTGAGTGATTAAACCACTGATTTTCATGAAATGGATGAATTTGTCAGCCTGTTTTAGGGTCTGAAATGGAGGAACCAGAAAATGTTTAGCACTTCCTTTAGTATAAAGGAACGGAAACATTATTGCAAGTTTTTtatacagtgaaaatgttttgaacTAACACGTTAATaacaaatgttattataataaaaatgtttgtaatttataCCTTGAATACATCATTTGGTTAACTCACAGAGCTGGTCATAATGCATATGATTCATTTTATAAAAGAGAGAACTTTCAATTTACATTAGGGATTAAACACTGATTGACACtgttttattgtactgtattgtatttctaCTGTAATACTAcacatggaaataaaacaagatgatgtaat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000886 True 1507 mRNA 0.42 4 6598852 6601477

Neighbor

gene id symbol gene type direction distance location
AMCG00000883 NA coding downstream 41901 6551012 ~ 6556951 (-)
AMCG00000880 NA coding downstream 242465 6340352 ~ 6356387 (-)
AMCG00000873 LOC107710929 coding downstream 309273 6253900 ~ 6289579 (-)
AMCG00000874 NA coding downstream 387459 6198591 ~ 6211393 (-)
AMCG00000875 LOC107725256,LOC103367750,LOC106582396,LOC107684456 coding downstream 456275 6127419 ~ 6142577 (-)
AMCG00000887 LOC105022551,LOC103370269 coding upstream 22780 6624257 ~ 6662496 (-)
AMCG00000885 NA coding upstream 63825 6665302 ~ 6678106 (-)
AMCG00000889 acvr2a,LOC103040899,LOC105016248,LOC106586327 coding upstream 146850 6748327 ~ 6752464 (-)
AMCG00000898 NA coding upstream 770443 7371920 ~ 7454374 (-)
AMCG00000896 NA coding upstream 1001780 7603257 ~ 7618404 (-)
G126887 NA non-coding downstream 217604 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 262986 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 648958 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 1026719 5569944 ~ 5572133 (-)
G126665 NA non-coding downstream 1134800 5462567 ~ 5464052 (-)
G126977 NA non-coding upstream 518767 7120244 ~ 7125041 (-)
G127145 NA non-coding upstream 2037119 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 2162636 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 2465363 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 2756871 9358348 ~ 9360596 (-)
G126700 NA other downstream 1025825 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 1616201 4957138 ~ 4982651 (-)
G126427 NA other downstream 1962336 4636096 ~ 4636516 (-)
AMCG00000804 NA other downstream 2942291 3553047 ~ 3656561 (-)
AMCG00000777 coq10b,LOC107690612 other downstream 3458363 3133876 ~ 3140489 (-)
AMCG00000888 LOC102209482 other upstream 88091 6689568 ~ 6733817 (-)
G127039 LOC100136012,LOC107575789 other upstream 1028438 7629915 ~ 7645722 (-)
G127292 NA other upstream 2817519 9418996 ~ 9419325 (-)
G127443 NA other upstream 3673210 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 4095379 10696856 ~ 10700364 (-)

Expression


Co-expression Network