AMCG00000900


Basic Information

Item Value
gene id AMCG00000900
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8290226 ~ 8296028 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000900
CCCAGAAGTATTGTTCAGTTGTTTACATTCATGCATAGTTTGTAAATGTGGTCAGGCCAGTTTTATCTACATCCATCCTTTGATCTTAACCCTTATTACGGCATTATCACTGTCCTAAATCCTGAAACAAATCCAAGCAGACTGaaacaagacacacacagaggcacagtGAGCAGGAGAAAGCAATTTTCCCACAACAGAGCAACaagcCTTGCTTTCCAGATATGGCTTCTACTGCAACAAACCCTGCAGGATACCAGGGTCGTTATGCACAAAGTTTTCAGCTGTTCCTGCAGCGCTCCACTGAACACAAAAGTATATTTGGTTTCATCGACAGAATTCTCCAGGATGAATTTCCAAGTCTTGGAGATGGAAAATCAACCCTAAATGTTTTGGGTGTTGGAAGTGGAGGAGGGGAAGTTGATGCCCATGTGTTGGATAAAATGCAGGCTAAGCACCCAGGAAAGTCCATCAGTGCGGATGTAGTGGAGCCCAGCTCTGAACTGATCCAGAACTTCAAAgCACTGGTAGCAAAGACCCCAAATCTTGAAAACATCACTTTCAACTGGCATACGATGACAAGTAGTGAGTATGAAAATCAAGTGAAAGACAAGAAAGAAGCCAAGAGATTTGACTTTATTCACATGATTCAGATGCTGTACTATGTGGAGGACTATTCAGCAACTATCAAGTTTTTTCATAGCCTCCTTAAACAGAAGGGCAAGCTCCTTATCATCCATGAATCAGCTAACAGTGGTTGGGAAATACTGTGGAAGACCTATAAGGAAGCACTCTGCTCGAATACGATCAGTGCATACCAATCAGCGGGTGACATCAAAGTCCATCTTGAGAACCTAGGCCTAAAGTATGAAGAACATGACATTCCCAATACCCTTGATATAACGGAGTGTTTCATCGAAGGAAATGAAACAGGACAGCTTCTTCTGGACTTCATGACAGACAAACCATATTTCTATGAAAAAACACCTCCTGATCTGAGAGCAGGGATTCTAGACTTAATGCGAAATAAATGCAGCACAGAAAGAGATGGGAGAATCATTTTCAATGGTAATTTGACTGCTCTATTAATTCATCCGTAAAGTATGGGTATACAGTGACATTAAGCCTGAGTCACTTTACAAGAGTGTTTTGTCATAAAATCCCATGTCTCTTCTGTTACTCGGGTCCTGTGACTATAGTGTTTGAAAGCATGCTTATAAATGCAACGAGAACAATTTGATTGAAGTACAAAATGcagtcattattttttttcctgaatctTTATCTTagaataaacaagaaaatagaTTCAAAAGGACATATTAGTGGACCTCCATGTTTTCAGTTGAGAACACATCATCACCCTCATTGACAAATTCATAACACAGTGCATTGTATTACTATTGTAAACGTGGAGGCATATAATGGACATGTAATCATaagtcattcattttaaataaagaaataaatattgttaccAAAGCCGATAAGCAATATCTGAAAATGGTTGAAAGGTAATGTCTTTTCtggttatgttttttaaaactgcattatgCAAAGAGtgtacagaaacagaaacagaaagtaCTAGCCTTGAAAAGTGCTTcctgtgtttataaatatagttttaaaaagtttttattgGGCCACCATTATAAGTATGAATTCACATCATACTTACAAACATCAATTTGACTGGGGATTAACCCGGGCATTACAGTTACTGTACAAATCCACTAGGCTGTGCTATAGTTCAGACAATTCCAAACAACAATGTTAAATTACTTCAAGGAATTGTGGTaatgttttctatttctatgaatatgcatgtgtgtatgcatatatatatata

Function

GO:

id name namespace
GO:0032259 methylation biological_process
GO:0046539 histamine N-methyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000900 True 1852 mRNA 0.38 8 8290226 8296028

Neighbor

gene id symbol gene type direction distance location
AMCG00000897 spopl,LOC107658226 coding downstream 58106 8218836 ~ 8232120 (-)
AMCG00000896 NA coding downstream 671822 7603257 ~ 7618404 (-)
AMCG00000898 NA coding downstream 835852 7371920 ~ 7454374 (-)
AMCG00000889 acvr2a,LOC103040899,LOC105016248,LOC106586327 coding downstream 1537762 6748327 ~ 6752464 (-)
AMCG00000885 NA coding downstream 1612120 6665302 ~ 6678106 (-)
AMCG00000899 NA coding upstream 11857 8307885 ~ 8316601 (-)
AMCG00000901 NA coding upstream 31969 8327997 ~ 8345029 (-)
AMCG00000902 NA coding upstream 117415 8413443 ~ 8426125 (-)
AMCG00000909 NA coding upstream 321243 8617271 ~ 8625351 (-)
AMCG00000916 NA coding upstream 357974 8654002 ~ 8661631 (-)
G126977 NA non-coding downstream 1165185 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 1908978 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 1954360 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2340332 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 2718093 5569944 ~ 5572133 (-)
G127145 NA non-coding upstream 342568 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 468085 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 770812 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 1062320 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 1112165 9408193 ~ 9408469 (-)
G127039 LOC100136012,LOC107575789 other downstream 644504 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1556409 6689568 ~ 6733817 (-)
G126700 NA other downstream 2717199 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3307575 4957138 ~ 4982651 (-)
G126427 NA other downstream 3653710 4636096 ~ 4636516 (-)
G127292 NA other upstream 1122968 9418996 ~ 9419325 (-)
G127443 NA other upstream 1978659 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2400828 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4401149 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4429666 12725694 ~ 12732601 (-)

Expression


Co-expression Network