AMCG00000901


Basic Information

Item Value
gene id AMCG00000901
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8327997 ~ 8345029 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000901
GTGTATGAGGCAGTCCCGTGTTACAGCGAATGCAGTCGGTACATCTGGGTGATGGAGGCCTGGTCCGTTTGTACGATTAACACTGTGGACAAAATGCCAGATTGCGGAGAAGGAGTACAAAGCAGAAAAATCAAGTGTGTGAATAACACAGGAGAAGGCCCTGGAGAGATTGTGGATGATGAACTGTGTGACCAAGAGGAAATGCCATTCAGGGCTCAGACCTGTTTTCTCCCATGTCCCGATGACTGTGTGATGTCCAGGTGGAGTGAATGGAGCAGATGCCCAATGCCATGTGACCAAACAGGAGTAAGAAGACGGATAAGACAAACCCTTAGACTCCCGCAGACTGGAAAAACATGCCCAGAGGACTCTGAGACTGAACCTTGCATTCTCAACACAAACTGCTTTACTTACCAGTACAATGTTTCAGattgGAGCACATGCCAGCTGAGAGAGAATGCAGTGTGTGGACAAGGAACCAAAACACGTCTACTGGATTGTGTGAGAAGTGATGGGAAGGTGGTGGAGCTAAGATATTGTGAACAGCGTTCTCGTACTGTAATACAGCCAGCTCATGAAGAGGGGAGACCTTGTCCTCCTCAGCTTTCTCAGGTCATCCCTTGTCCAGTCAGGCCATGCTACACGTGGGTACTGGGAGAATGGGCTCCGTGTCATGTGGAGGGGGCCGAGTGTGGTGAGGGGATTCGAAAAAGGAATCTAACATGTGTAGTGCACAGAGGCTCAGAGACTGACTTGTCTTCTGCCAAACCAGTGGAAGAGGAAAAATGTGATGCTAGGCTCATGAAAGCAAGTGGACAGACATTGCAATTGCCTTGTTCTGTACCTTGTCCAGGTGACTGTCATTTGACAGAGTGGACATTATGGAGTTCTTGTCAACTAACCTGCCTTGACGGGAGAAGCTTTGAGACAACCGGACACCAAGCACGCTCCAGAGCTGTGATCATTCAGGCAGTCGAAAATCAAGATAGCTGCCCACTTCAAGTCTTTGAAACAAGGCCTTGTAAAGGAGGAAAATGCCATAACTATGAATGGAGGACAAGCCCATGGAGAGACAATGAACGCTCAGTGTGGTGTCAGCGTTCAGATGGCGTTAATGTGACAGGAGGATGTTTTTTGCAGAATCAACCATCGACTATCAGGCACTGCCATCCACCTTGCACAAAACCCTTTTCCCACTGTACACAGAGTGGTGTCTGTGGGTGTGAAAATGGCTACACAGAAGTAATGACAGCATATGGTTTCCTCGATTACTGTACAAAAACTCCAGGAGCAGATAACAAAAAAGCAGATGTCAAAACCAGTGCTGGGAAATTCAAACCCGGGACTTCAAAGATTCAGGACTTTTTCAAAGAGTGGTCAATTCAACCTTTTGGACCA

Function

GO:

id name namespace
GO:0055008 cardiac muscle tissue morphogenesis biological_process
GO:0060415 muscle tissue morphogenesis biological_process
GO:0048644 muscle organ morphogenesis biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000901 True 1398 mRNA 0.48 10 8327997 8345029

Neighbor

gene id symbol gene type direction distance location
AMCG00000899 NA coding downstream 11396 8307885 ~ 8316601 (-)
AMCG00000900 NA coding downstream 31969 8290226 ~ 8296028 (-)
AMCG00000897 spopl,LOC107658226 coding downstream 95877 8218836 ~ 8232120 (-)
AMCG00000896 NA coding downstream 709593 7603257 ~ 7618404 (-)
AMCG00000898 NA coding downstream 873623 7371920 ~ 7454374 (-)
AMCG00000902 NA coding upstream 68414 8413443 ~ 8426125 (-)
AMCG00000909 NA coding upstream 272242 8617271 ~ 8625351 (-)
AMCG00000916 NA coding upstream 308973 8654002 ~ 8661631 (-)
AMCG00000917 NA coding upstream 317088 8662117 ~ 8664221 (-)
AMCG00000914 chpf,LOC106581838 coding upstream 545197 8890226 ~ 8900361 (-)
G126977 NA non-coding downstream 1202956 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 1946749 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 1992131 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2378103 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 2755864 5569944 ~ 5572133 (-)
G127145 NA non-coding upstream 293567 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 419084 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 721811 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 1013319 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 1063164 9408193 ~ 9408469 (-)
G127039 LOC100136012,LOC107575789 other downstream 682275 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1594180 6689568 ~ 6733817 (-)
G126700 NA other downstream 2754970 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3345346 4957138 ~ 4982651 (-)
G126427 NA other downstream 3691481 4636096 ~ 4636516 (-)
G127292 NA other upstream 1073967 9418996 ~ 9419325 (-)
G127443 NA other upstream 1929658 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2351827 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4352148 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4380665 12725694 ~ 12732601 (-)

Expression


Co-expression Network