AMCG00000909


Basic Information

Item Value
gene id AMCG00000909
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8617271 ~ 8625351 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000909
ATGTCACATCCTCATATTCCACCAAGCTATGATGAATCAAGGAATCCACTTTATGCTCCTCACCATGGAGAACCTCCAGCTTATGGCTTTGAAGGTCAGCCTCAGCCAGGCATGTACCCCGGGCAACCAAGCATGTACCCCGGGCAACCAAGCATGTACCCCGGGCAACCAAGCATGTACCCCGGGCAGCCAAATATGTACTCCGGACAGCCAGGCATGTTTCCGGGACAGCCAGGCATGTTTCCGGGACAGCCAGGACCGCAGTATGGGCCCGGTCATCCAGCACCTGGAATGCCACCAATGATGCCACCAGTGATCCCTCCAATGGTTCCGACTTCTCCCTTAAACCAAGGAGACACAGAAGGATTCACCTCTCAGAGCTGGGATGACAAGACGGTACGACACGCATTCATCCGGAAAGTATACCTCATTCTGGCAGCCCAGCTCCTGGTTACAGTCACATTTGTGGCTGTCTTCACATTTTGttcACCAGTTCGCCTGTTTGTCTCCagaaattcatatatatattggatATCCTATGGTTTTTTCACGGTCACGTATCTTGTACTTGTTTGCTGTCAGGGACCTAGGAGGCGTTTCCCTTGGAATATAATCTTGCTGGTGATATTTACACTTGCTATGTCATATATGACAGGAACAATTTCAAGttattATGACACCAAAGCAGTGTTTCTTGCTCTTGGAATAACTGCCATCGTCTGCATCATAGTGACTATCTTCTGTTTTCAGACGAAGGTGGATTTCACTTCATGTGGAGGGCTGTTCTGTGTGCTGGGAATTGTTGTTATGGTCACTGGGATCATCACTGCAATCGTGttgtcatttaaatatATTCCATGGCTTCATATGTTGTATGCAGCCATCGGAGCAATTGTCTACACCTTGTTCTTGGCCTACCACACTCAGCTTCTCATTGGGAATCGAAAACACTCCATCAGCCCTGAGGAATATGTCTACGGAGCGCTCTCTCTGTACGTCGATATTATCCAGATCTTTACTTTCCTGTTGCAACTCATTGGCTCGTCAAGATAGGAATGGAGCCGAAGAACAGCAGGAACAAAATTAGATGTTTACCTTTCTCTTCTCATGCACACTTAACTGTTTGTTACATGTGTAAATGCCATGCTGATTTTTTACATTCTACATAGAGACATATGCTTTGTTTGAAGTGTACACATTTCTGTAGCCCTGagctttttcatttattcagtAGCAGTAGTTATTAGATCAAATACCCACAACTACTTTATATGTTCATGTCATTATTTTCCCTAAAATATCTTGGGCTCATCATTTTATTCAACCATAAACATCAAAGGTGAACGAAGTGCACCATTACTAAATAACtacatttgatttttctttccattgttcGTATATATGTTTTGCTTAACTGATTTGTGATGGATATttgagttgtattttttttttttaattgaagaaatgtatacattgtattCCTTGTTACTGAAATGATATTGTTTACACTGGTTATTGAAAGGGATGTACGATAAGTGAAAGTGGACATTAGTTCTGGAACTGTCAATGGCATAGCTATACCTgcaccataaaataaatgtgtgggtCAGCATTTTGCATGGCACAGTAATTATTCAATGTGCAATATAAACAGCCATACAAAAGTTTAATGTTTTACTGGCTCTccctgaaatgtaaaatgttgtcaATATGGGAAAAAAtccttattttaaagaaaaatgctctacttctgtattttgttaaaaataaaatgtatttaatgtattgctgGTATATTTCACCATCTGACTCCAaagcaaaatattgatttaagaagaatattaagaaacaaaattaaaccaggTGGTGCTTAGAAACTGTATCCTAAAGAAAACTTTGCTGCAGAAAAATTGAGAGGAAGAATAATTTTATAGCACAATGAATACAGAACACTATCTTTAAAAAGGGtccataaaatgtattgatatttgGTTGGTGTCACACAGATAAGATGGATGTTTTGATAAAAACATTGTTACTGCAAGTTGAATGGGATAGACTCCAGTTGTTTGTCAATATGCATgtgctgttaaataaatatgaccAAATGCAATGTATATGTCTAAGATTTGTGTTGCGATGTCATTTACTTTTGTGATTGATTTCACATTGTTTAACAACATTTGAAATCAACTAAGGCACACTGACTTaattcacaaatgaaaataacatttcaatgaattaacattttctagtatatttttttctctggtAACATCCAACTTTTACATTAGATAAACATTCAAAAGAACATGTTTGTATCACGTCCGTTGAGTTCTGTTCTGACATTTTGGGCAGCACTGAAGTAGAATGCAAACCCCATTTCATTAATTGTTGTCTGAATAAATTAACATGATGGAAATGTCAAGAAAGAGTTTTTACAGGCCTGGTAAACTTCAATCATCATTTAaccaattttaataatttaaaaagcattatacCACACTAACCAAGTCTAGTTTTAGTATTGTCATGGGTCTTGTTTGAATTCGCCTAACTGGAAAATGAGactgaattaaagaaaatatatacaatatattttattacattttcatggaCAGGCAGAAGGAAGAGATTGTTTTAATAGTGCAGTCTGGATTCAGGTCATTCGGTTTTTGGTAATGTATTGTATCTTTCACGCTCATAAATTCCTTCATTTGCTTTCTTCATCCTCTGTCGTACTTTCAATTGTTTTAAGCGATTCTTATCAACCTCTCGCTTTGCAAGAAGAAAACCAATGATTCCAGAGGGAAATGTTAATACCAAGCAAGTCCAACTTTCATCATAGGGTTATGGGCTTTCCGTTTGGGAATGTACTCTGGTCCCTCAGGTGCGGATTTTCCTGGTTCTGCTGCAGAAAGCATGGGCGCGCTTCTGTGATGCCAGCGCAACAATGCACCATTATACTGCCACACCTGACCTGGACTTCTTAGAGCAATTGTCCCCATCAGATTCCTACAGGGCGCCGCCATCTTGCACAAATTCCC

Function

GO: NA

KEGG:

id description
K24205 TMBIM, LFG; protein lifeguard

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000909 True 3047 mRNA 0.38 13 8617271 8625351

Neighbor

gene id symbol gene type direction distance location
AMCG00000902 NA coding downstream 191146 8413443 ~ 8426125 (-)
AMCG00000901 NA coding downstream 272242 8327997 ~ 8345029 (-)
AMCG00000899 NA coding downstream 300670 8307885 ~ 8316601 (-)
AMCG00000900 NA coding downstream 321243 8290226 ~ 8296028 (-)
AMCG00000897 spopl,LOC107658226 coding downstream 385151 8218836 ~ 8232120 (-)
AMCG00000916 NA coding upstream 28651 8654002 ~ 8661631 (-)
AMCG00000917 NA coding upstream 36766 8662117 ~ 8664221 (-)
AMCG00000914 chpf,LOC106581838 coding upstream 264875 8890226 ~ 8900361 (-)
AMCG00000915 NA coding upstream 276884 8902235 ~ 8908000 (-)
AMCG00000923 cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 coding upstream 377798 9003149 ~ 9044874 (-)
G126977 NA non-coding downstream 1492230 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 2236023 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 2281405 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2667377 5943386 ~ 5949894 (-)
G126698 NA non-coding downstream 3045138 5569944 ~ 5572133 (-)
G127145 NA non-coding upstream 13245 8638596 ~ 8639883 (-)
G127159 NA non-coding upstream 138762 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 441489 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 732997 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 782842 9408193 ~ 9408469 (-)
G127039 LOC100136012,LOC107575789 other downstream 971549 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1883454 6689568 ~ 6733817 (-)
G126700 NA other downstream 3044244 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3634620 4957138 ~ 4982651 (-)
G126427 NA other downstream 3980755 4636096 ~ 4636516 (-)
G127292 NA other upstream 793645 9418996 ~ 9419325 (-)
G127443 NA other upstream 1649336 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2071505 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4071826 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4100343 12725694 ~ 12732601 (-)

Expression


Co-expression Network