AMCG00000915


Basic Information

Item Value
gene id AMCG00000915
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8902235 ~ 8908000 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000915
CAAAACAACATCTGGCTCATCTTCACTTCAGCCAGAGGTTGTGTATAGACTCTCTGACTCACTCAGGGACATCATTTCCATTTCCAACCCTGATGCTGAGATTACACGCCAGCTCTCTAATAGAAATCGTCCGGATTTAGGACCGGGCGAATGTCCCCGTCCTCGGCCGCCCGCAGACGCCTGCAGCTGCGGGACAAAGTGCGAGTACTGCCGCTGTACAGACGTCTGCAGCTCATCAACAAGCAGAAGTATGGTAATCTATGGAAGATGACATTTAAAGGTCGGGATGTGGTGAATGTTGCCGATGCACAGTTGATTGAAAAGGTGTTAAGGAATGAGGGGACGTTTCCCAGCAGAGGAGACATTAAAGAGTGGAAGGAATATCGTGTGCAAAACAATTTGGAATTTGGACCTGTTCTCAGgGAAGGTGAAGACTGGCACAGGCTTCGTGCTGTTCTTAATCAGCGAATATTAAAACCCAGAGAGGCCAAGTTATACGACACAACTATCAACAGAGTTGTTACCGACCTGATCGGAAGAATTCAGTTcctaaaggaaacaaaagggtCTGGAATCATGGTTTATGATCTTGCAAATGAAATGTACCGATTTTCATTTGAAGGTGTGTCTTCTATTGTACTGGGCTCTCGACTGGGATGCCTGCAACCCAACATCCCTAAAGAAACACAGGAGTTTATTAATGCTGTTGGCACCATGCTCCAAATGTTCGCTATTGTCAATGTGCTGCCAAAGTGGACTCGATCCTTTCTTCCATTCTGGAAAAAGCACAATAAAGCCTGGGATACCATGTTCAGTTTTGCCATAATGAAAGTTGATCAAAGATTGGCTGATCTTCAGACCCAGCTTGAGAGAAGTGATCCAATTGAAGAAGATTACCTGACTTATTTATTAACATCTCAGAAACTGACTCTGCCAGAGATCTATAGCAGTGTCACTGATCTGCTGCTGGCTGGGGTGGATACTACATCAAATACCCTGACCTGGGCTCTCTATCACTTGGCGAGAGACCAACAGCTACAGGAATCCGTCTACAGAGAGGTGTCAGGTGTCACTGCTGGTGACCAGATACCTACAGCCGAGGACCTGGAACAAATGCCACTTGTCAAGGCAGTTATTAAGGAAGTTCTTAGattGTATCCTGTGGTTCCTGCAAATGCTAGGGTTTTGCAAAAAGACATTGTTCTTGAAGACTACCATCTACCATCTGAGGTTCTTGTTGTCCTTTGCCACTACGCTGCATCACTAGATGGGTCACAGTTTCCCGATCCATTAGCTTTCAAGCCCGAACGATGGATTAAAGCAAGTCAAGTCCATAAAGCACATCCCTTCAGCTCAATACCTTTTGGATATGGAGTCCGAGGTTGCATAGGTCGCAGGATAGCAGAGCTGGAAATGTATCTGACCTTATCAAGGCTGTTGAAgcactttcaaatcaaaatggaTTCCAAATTGAAACCGATTTTTCCGAAGACTAGGATCCTGATAGTCCCCGGAGCTCCCGTAAATCTGGAGTTTTGGGACCGAAGCTCAAACTGAGGTTTACATTCACAAAGTGGATATAATGAGTAATACCATTTTTGAGGCCCTACTACAGTTATTAAGAGACATATTTGACCAGTTTTAAGTAATTTCCATTCTTTATTGTGGGAAAAACATTGAAGTGCAAACTtatgatatatgtgtgtgtgtgtatgttatacaaaataacacactGTTTACTAAATCTTAAACAGATGTTTCCTATTATATTAACTTACTTAACcatgtttttaaacactttacaGTGAGTGAGTAATCTGGTCTGCTTATTGATGAGTGAAAGGCCAAATTTCTGGAAGGATATTACTTGTTTGAGACAGTTCACTAGCTAATCTCCTCATCCAAAATAATCATAACttggaacaaaatgtgaataaatgtgatcaGTCTTAAATCACTATATGTATGAAAGATTTGTCTAACCTTAATAGAtactaattttgtattttattttttataatcatctgattttatacacatacaacacaggacagttctctgcagctgcattttattatgtgtatgtcaaatatatataatattcatatatcCCCATTGTTAGAAAGCTTCCAAACTCCTGTTCCTGTATTTGAACTGTCCTTTATTAAACAGGTCTTGGAGTG

Function

GO:

id name namespace
GO:0005488 binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K17960 CYP49A; cytochrome P450 family 49 subfamily A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000915 True 2183 mRNA 0.41 9 8902235 8908000

Neighbor

gene id symbol gene type direction distance location
AMCG00000914 chpf,LOC106581838 coding downstream 1874 8890226 ~ 8900361 (-)
AMCG00000917 NA coding downstream 238014 8662117 ~ 8664221 (-)
AMCG00000916 NA coding downstream 240604 8654002 ~ 8661631 (-)
AMCG00000909 NA coding downstream 276884 8617271 ~ 8625351 (-)
AMCG00000902 NA coding downstream 476110 8413443 ~ 8426125 (-)
AMCG00000923 cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 coding upstream 95149 9003149 ~ 9044874 (-)
AMCG00000922 NA coding upstream 138121 9046121 ~ 9048715 (-)
AMCG00000921 LOC107560461,LOC107672280 coding upstream 147744 9055744 ~ 9057523 (-)
AMCG00000920 NA coding upstream 164458 9072458 ~ 9076264 (-)
AMCG00000926 NA coding upstream 175724 9083724 ~ 9108370 (-)
G127159 NA non-coding downstream 137843 8764113 ~ 8764392 (-)
G127145 NA non-coding downstream 262352 8638596 ~ 8639883 (-)
G126977 NA non-coding downstream 1777194 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 2520987 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 2566369 6334713 ~ 6335866 (-)
G127229 NA non-coding upstream 158840 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 450348 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 500193 9408193 ~ 9408469 (-)
G127300 NA non-coding upstream 547971 9455971 ~ 9468876 (-)
G127325 NA non-coding upstream 642650 9550650 ~ 9557148 (-)
G127039 LOC100136012,LOC107575789 other downstream 1256513 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 2168418 6689568 ~ 6733817 (-)
G126700 NA other downstream 3329208 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3919584 4957138 ~ 4982651 (-)
G126427 NA other downstream 4265719 4636096 ~ 4636516 (-)
G127292 NA other upstream 510996 9418996 ~ 9419325 (-)
G127443 NA other upstream 1366687 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 1788856 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 3789177 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 3817694 12725694 ~ 12732601 (-)

Expression


Co-expression Network