AMCG00000916


Basic Information

Item Value
gene id AMCG00000916
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8654002 ~ 8661631 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000916
ATGCACGATGGGCAGTCAAGCGCTTACCTGAATGAAGAACAGAAATATGTGCTGGCTAACTTCAATACAAAGGGAACAGGCATAACTCACATTGTGGGGAGAAGATTATCTGTTATTGATGAATCCGGCAACTCATTTCTGTCTCATTCTGATATTAGTTATGACCGAACTGATGATGACCTGCGTTCTTCACTTGCTCCGGTCGTGGGGGCTCCTGTTCAGCCTAAACGTGGTCGGGTCAACGGACACTCGGGTGACCTTTTAGCATCAAAGCCAGCTGAATACGTAAAAGATTCCATTGATCCAAAAAGTACTGTGATCATACCCGAAGACAGGAGTCACATTCATGCGGTGTCTACTATTGAGATCATCCCTAAGAGAAAGTCTTTCAGGAGCAGAAAACTCTCCCCTTTAAATGAACAAACCACGATTTGGACTATCAATGATGAAACAAATGCAGACAATGTCGAATGTGTGACCGACATGGAAGCAGACTCTAATGTTAAATCCCAGAATGTGCCAACTGTCCCTGAAGTAAAAAGATcacatcatatatttatatccaAAACGGTTATCAGGCCTGAAACATGTGTTCCCTGTGGGAAGAGGATCAAATTTGGAAAGATGGCAGTGAAGTGTAGGGACTGCCGGATGGTTGCGCACCCTGAATGTAAGGACCTCTGTTCTTACTACTGTGATCCCAGTGTCTCGAACCCTACTGCTCCAGATTTGGAGGGTATTTTAGCAAATTATGCTCCTTCTGTCCCACCAATGATCCCTCCCATAGTTGTTCAGTGTGCGAATGAAATTGAGAAAAGAGGATTACAAGAGACTGGAATTTACAGAGTGCCCGGCTGTGAACGAGTAGTTAGAGAGCTGAAGGAGAAATTCTTGCAGGGAAAAGGGATGGTTCCTCTTAGTAAGGTGGATGATATTCATGTTGTCTGTGGACTTCTCAAAGACTTTCTGAGGAAGTTAAAGGAACCTCTTGTCACGTTTCATCTTCACAAGGCATTCATGGAAGCCTgtgATATTCCTGATGATGATAATAGCACTGCAGCCATGTGTCAAGCTGTAGGAGAATTGCCACCACCGAACAGAGACACCCTGGCTTTTCTGATGCTGCATCTGCAAAGAGTGATGAAGAGTTCATTCTGTAAAATGGATTTGAATAATCTGGCCAGGGTATTCGGGCCCACAATAGTTGGACACTCTGTCCCTGAACCCTCTCCAATGATGATACTAAAGGATACCACACTGCAGCCTAAAGTGGTTGCTCGCCTCCTGTCCCTGCCTTCAGAGTATTGGAAAGGGTTCATCCTGGTGGAAAACGATCAAATCATTTCATCTGTGATCGATGCCAACATCAACAACGATAGCAACTATATGGAAAAAGATCGCCTGTTTAAGCCCCTGACGTCACCGGAGATGAGCAACATCTCTAAAACCCCCGTCTCCAGCTCCCTGAGAGGCAAATTTAAATCCACCCTGGGCACGGCCTTCAGTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000916 True 1509 mRNA 0.45 12 8654002 8661631

Neighbor

gene id symbol gene type direction distance location
AMCG00000909 NA coding downstream 28651 8617271 ~ 8625351 (-)
AMCG00000902 NA coding downstream 227877 8413443 ~ 8426125 (-)
AMCG00000901 NA coding downstream 308973 8327997 ~ 8345029 (-)
AMCG00000899 NA coding downstream 337401 8307885 ~ 8316601 (-)
AMCG00000900 NA coding downstream 357974 8290226 ~ 8296028 (-)
AMCG00000917 NA coding upstream 486 8662117 ~ 8664221 (-)
AMCG00000914 chpf,LOC106581838 coding upstream 228595 8890226 ~ 8900361 (-)
AMCG00000915 NA coding upstream 240604 8902235 ~ 8908000 (-)
AMCG00000923 cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 coding upstream 341518 9003149 ~ 9044874 (-)
AMCG00000922 NA coding upstream 384490 9046121 ~ 9048715 (-)
G127145 NA non-coding downstream 14119 8638596 ~ 8639883 (-)
G126977 NA non-coding downstream 1528961 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 2272754 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 2318136 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2704108 5943386 ~ 5949894 (-)
G127159 NA non-coding upstream 102482 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 405209 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 696717 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 746562 9408193 ~ 9408469 (-)
G127300 NA non-coding upstream 794340 9455971 ~ 9468876 (-)
G127039 LOC100136012,LOC107575789 other downstream 1008280 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1920185 6689568 ~ 6733817 (-)
G126700 NA other downstream 3080975 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3671351 4957138 ~ 4982651 (-)
G126427 NA other downstream 4017486 4636096 ~ 4636516 (-)
G127292 NA other upstream 757365 9418996 ~ 9419325 (-)
G127443 NA other upstream 1613056 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2035225 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4035546 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4064063 12725694 ~ 12732601 (-)

Expression


Co-expression Network