AMCG00000917


Basic Information

Item Value
gene id AMCG00000917
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 8662117 ~ 8664221 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000917
CAGAATGGGGGAGACATTTGTGAAGGAGCTTTTGAATTTGTGTCTGATTAAAATTGCTGTGGATGACAGTACAAACCCAGAActtgaATTCCTTCAGCTGGTGAGGAATTATGAGGAGACGAGGAAAAAATGGCTTCAGTCAGAGCTAGAACTAAAGAAGTTCAAAGAGCTTTTCCTGAAATCAGAATTGGCTAAATCAGCCCTGGAGGTAAAACTGAAACATGCAAGGAACCAGGTTGATGTTGAAATGAAGAAACGGCACAAAGCAGAAGGAGATTATGAACATCTCGTAAGCATT

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000917 True 298 mRNA 0.41 2 8662117 8664221

Neighbor

gene id symbol gene type direction distance location
AMCG00000916 NA coding downstream 486 8654002 ~ 8661631 (-)
AMCG00000909 NA coding downstream 36766 8617271 ~ 8625351 (-)
AMCG00000902 NA coding downstream 235992 8413443 ~ 8426125 (-)
AMCG00000901 NA coding downstream 317088 8327997 ~ 8345029 (-)
AMCG00000899 NA coding downstream 345516 8307885 ~ 8316601 (-)
AMCG00000914 chpf,LOC106581838 coding upstream 226005 8890226 ~ 8900361 (-)
AMCG00000915 NA coding upstream 238014 8902235 ~ 8908000 (-)
AMCG00000923 cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 coding upstream 338928 9003149 ~ 9044874 (-)
AMCG00000922 NA coding upstream 381900 9046121 ~ 9048715 (-)
AMCG00000921 LOC107560461,LOC107672280 coding upstream 391523 9055744 ~ 9057523 (-)
G127145 NA non-coding downstream 22234 8638596 ~ 8639883 (-)
G126977 NA non-coding downstream 1537076 7120244 ~ 7125041 (-)
G126887 NA non-coding downstream 2280869 6380963 ~ 6381248 (-)
G126873 NA non-coding downstream 2326251 6334713 ~ 6335866 (-)
G126767 NA non-coding downstream 2712223 5943386 ~ 5949894 (-)
G127159 NA non-coding upstream 99892 8764113 ~ 8764392 (-)
G127229 NA non-coding upstream 402619 9066840 ~ 9083586 (-)
G127275 NA non-coding upstream 694127 9358348 ~ 9360596 (-)
G127291 NA non-coding upstream 743972 9408193 ~ 9408469 (-)
G127300 NA non-coding upstream 791750 9455971 ~ 9468876 (-)
G127039 LOC100136012,LOC107575789 other downstream 1016395 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 1928300 6689568 ~ 6733817 (-)
G126700 NA other downstream 3089090 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 3679466 4957138 ~ 4982651 (-)
G126427 NA other downstream 4025601 4636096 ~ 4636516 (-)
G127292 NA other upstream 754775 9418996 ~ 9419325 (-)
G127443 NA other upstream 1610466 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 2032635 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 4032956 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 4061473 12725694 ~ 12732601 (-)

Expression


Co-expression Network