Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000921 |
| gene name | LOC107560461,LOC107672280 |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030137.1 |
| NCBI id | CM030137.1 |
| chromosome length | 27060302 |
| location | 9055744 ~ 9057523 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: beta-crystallin A2-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000921 | True | 441 | mRNA | 0.48 | 3 | 9055744 | 9057523 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000922 | NA | coding | downstream | 7029 | 9046121 ~ 9048715 (-) |
| AMCG00000923 | cdk5r2a,LOC107748545,LOC107660098,LOC107566326,LOC107566799,LOC107705611 | coding | downstream | 10870 | 9003149 ~ 9044874 (-) |
| AMCG00000915 | NA | coding | downstream | 147744 | 8902235 ~ 8908000 (-) |
| AMCG00000914 | chpf,LOC106581838 | coding | downstream | 155383 | 8890226 ~ 8900361 (-) |
| AMCG00000917 | NA | coding | downstream | 391523 | 8662117 ~ 8664221 (-) |
| AMCG00000920 | NA | coding | upstream | 14935 | 9072458 ~ 9076264 (-) |
| AMCG00000926 | NA | coding | upstream | 26201 | 9083724 ~ 9108370 (-) |
| AMCG00000925 | kalrn,LOC106581831,LOC106586158 | coding | upstream | 80292 | 9137815 ~ 9196563 (-) |
| AMCG00000931 | NA | coding | upstream | 226581 | 9284104 ~ 9287476 (-) |
| AMCG00000932 | prpf40a | coding | upstream | 374765 | 9432288 ~ 9453766 (-) |
| G127159 | NA | non-coding | downstream | 291352 | 8764113 ~ 8764392 (-) |
| G127145 | NA | non-coding | downstream | 415861 | 8638596 ~ 8639883 (-) |
| G126977 | NA | non-coding | downstream | 1930703 | 7120244 ~ 7125041 (-) |
| G126887 | NA | non-coding | downstream | 2674496 | 6380963 ~ 6381248 (-) |
| G126873 | NA | non-coding | downstream | 2719878 | 6334713 ~ 6335866 (-) |
| G127229 | NA | non-coding | upstream | 9317 | 9066840 ~ 9083586 (-) |
| G127275 | NA | non-coding | upstream | 300825 | 9358348 ~ 9360596 (-) |
| G127291 | NA | non-coding | upstream | 350670 | 9408193 ~ 9408469 (-) |
| G127300 | NA | non-coding | upstream | 398448 | 9455971 ~ 9468876 (-) |
| G127325 | NA | non-coding | upstream | 493127 | 9550650 ~ 9557148 (-) |
| G127039 | LOC100136012,LOC107575789 | other | downstream | 1410022 | 7629915 ~ 7645722 (-) |
| AMCG00000888 | LOC102209482 | other | downstream | 2321927 | 6689568 ~ 6733817 (-) |
| G126700 | NA | other | downstream | 3482717 | 5572705 ~ 5573027 (-) |
| AMCG00000838 | cacnb4,LOC108434427 | other | downstream | 4073093 | 4957138 ~ 4982651 (-) |
| G126427 | NA | other | downstream | 4419228 | 4636096 ~ 4636516 (-) |
| G127292 | NA | other | upstream | 361473 | 9418996 ~ 9419325 (-) |
| G127443 | NA | other | upstream | 1217164 | 10274687 ~ 10278211 (-) |
| AMCG00000960 | NA | other | upstream | 1639333 | 10696856 ~ 10700364 (-) |
| AMCG00001041 | cir1,si:ch73-167c12.2 | other | upstream | 3639654 | 12697177 ~ 12703910 (-) |
| AMCG00001039 | NA | other | upstream | 3668171 | 12725694 ~ 12732601 (-) |
