AMCG00000928


Basic Information

Item Value
gene id AMCG00000928
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 9278194 ~ 9281019 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000928
TCTGAAGATCAGGTGACAACCATACATAAAGGTCTAGACCGCTGTGCGGCTTTATTACAAGGTATACTTCTAACTGAAAAATCAGATGCTCAGCCTGCAACCTCAAAACTAGGAAAAACGGTTGTAAAGTCCAAACCAAGAGTAACATTTGGCAAAGGTGAGAATGGGAAAAGAAAGCCACAGAGGAAGACGGGCCTAATCGGTCAAGCTCAGAAAGAAGCAGTTGCTGTAAAGAAGACTACTTTGCCTTCTAATTCCTGCCCTGGGATGAAAGAAGACGGATGTGTGAACTCTGTGGAGACTCCTGTTGCCCAGCCAGTGTTGGCCCCTTTTGCCCAGCACTTCTCTGAGGCTCAGCCAGCTCTGTGTAAGGATGTCCAAACACAGATGTCTCTGATGAGCTACCCAGTACCAGGAAAGGGGAGCCTCACACATCCAGgaTCAAAAAGTTCAACAGCATTTAACTGTCGCTTGACTACATCCACTCCAACATTGTCTCCTCAGAAATCTGGTAGTCAACATAACATTCAAACTAATCTGTCAAATGATGTGCATTGCCAAGCAGCTTTCCAAGGTGGGCATAGCTTTTTTCCATCACAAACGGGGCCTGTGACTACATCTCCTGCTGTGCTCATTGAAGATGTTGAACAGAGCGTGCCACAGCCTCGGTACAGCAAGGAAATGGGAGATTCAGGGCACACAAGCCATGAGTCCTTACAGGAGCAGGCAATGCTGAGACAGATCCAGGTACATCTTGCCCACCTGCAGCAAGAAACAAATACTCAGCAGATGGCAACGCAAGCTTTGAGTCAAGGTCTGCAACCCCTGTCCAATGAAGCAGCGGAGTACACTGAAGAAACCACAAGCGATGAGGAAGAAACTGACTCGGTGGATATTATGCCAGTGCGGGACACTGGCTGTCAGACAAGTTTTGACAGACAAAAGCTGTTCCTGAAGTCAAGAAAGATGAGCCCTGAACAGACTGCCAAGAAAGTCAAGACTGTGAAATACCTCCTAGGAGAACTAAAGACCCTCGTTGCTGATCAAGACGACTCTGAGATTCTCCGGCTGATCGCAGAAGTGGAGGACTGTGTCTCCTTGCTTCCAGCCATGGTGGGAAGTACAAATGTTCAGGCAGAAATCGCTCTGTCCCTGCAGCCTCTGAGAAGTGAGAACGCACAGTTGCGAAGACGCCTTAGGATTGTAAACCAGCAGCTGAGGGAGCGTGAACGAGCAGAGAAGGAGTCCAGACCTGTTGACTGCAACTTTGAGGTAATCTCCCTGCAGGCCATGATCATGACACTGCAGAGCCAGCTGAAGGAGTCCCACAGGAGTGCTGAAGCACTACAGAGGAAGAACGAAGAACTACTTCAGTCTTTCGCCGAACAGCAACGAGAAAATCTCCAGCTACGAAAAGCCATggaggacaaagagagagaattaCAGCAGAACCGACAGCGGAGTGAGGCGGACACAGCTAGGGTCAAAATGGGTAAA

Function

GO: NA

KEGG:

id description
K16541 CCDC14; coiled-coil domain-containing protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000928 True 1497 mRNA 0.49 9 9278194 9281019

Neighbor

gene id symbol gene type direction distance location
AMCG00000924 NA coding upstream 245076 9032156 ~ 9033118 (+)
AMCG00000918 wnt10a,LOC107663825,LOC107562105,LOC107672309,LOC107560469 coding upstream 317410 8943842 ~ 8960784 (+)
AMCG00000919 wnt6,LOC107672249,LOC107560470,LOC107663826,LOC107562106 coding upstream 348927 8918752 ~ 8929267 (+)
AMCG00000912 LOC106586149 coding upstream 397266 8869964 ~ 8880928 (+)
AMCG00000911 asic4 coding upstream 478573 8798586 ~ 8799621 (+)
AMCG00000927 NA coding downstream 13452 9294471 ~ 9358158 (+)
AMCG00000930 fmnl2,LOC107745270,LOC106581828 coding downstream 114599 9395618 ~ 9431056 (+)
AMCG00000929 NA coding downstream 173138 9454157 ~ 9456101 (+)
AMCG00000935 NA coding downstream 237262 9518281 ~ 9553651 (+)
AMCG00000934 kcnj3 coding downstream 295042 9576061 ~ 9577701 (+)
G127206 NA non-coding upstream 195313 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 638371 8638596 ~ 8639823 (+)
G127096 NA non-coding upstream 983321 8294518 ~ 8294873 (+)
G127091 NA non-coding upstream 988388 8288789 ~ 8289806 (+)
G127038 LOC100136012 non-coding upstream 1632474 7629902 ~ 7645720 (+)
G127278 NA non-coding downstream 82088 9363107 ~ 9377589 (+)
G127509 NA non-coding downstream 1161974 10442993 ~ 10444937 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding downstream 2390749 11671768 ~ 11742750 (+)
G127924 NA non-coding downstream 2813122 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 3259062 12540081 ~ 12540318 (+)
G127134 NA other upstream 657999 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 3812213 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 7464037 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 7579621 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 7672163 1599696 ~ 1606031 (+)
AMCG00000949 NA other downstream 819264 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 2718645 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 3007931 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 5869256 15150275 ~ 15184392 (+)
G128823 NA other downstream 6128093 15409112 ~ 15420880 (+)

Expression


Co-expression Network