AMCG00000929


Basic Information

Item Value
gene id AMCG00000929
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 9454157 ~ 9456101 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000929
ATGCCTCGAGGTGTGAAGAGGGTTACCGGCCATAAAGCAACGGTAACCCCAGAGTCTGCATCCCAAGATCTCTACAACTCTGAAGATGTTATCCGGATGCTGGATAGGGAGTGGGAGGCACTGGACCAAAATGATCAAAATGCGACTTTAGAGATTAGCCGGTCAACCGTGCATAGAGGTCCAGATCTGCAGCAGATAAACCAGATTGCAGGACATAAAAAATCATCCCGAAGTGGAAGTTACTGGCCAACCAGAATATTCGCCATGCTTTGCTGCATTGTTATACTGTCTGCAATTGCATTTCTCCTGGCGATCTTCTACGTTATTTTAAAAGATTTACGCTCTGAGAAAGTTACAACTGAAGATGGTATAGAGATAAATCTGTTGGGGTTCTGGAGCTTGCTGATTTTGTCTGTGATTGCTGGCATCTCGTGTTGTAGTTTCTCATGGACCCTGACATACTTTGATTCTTTTGAACCTGGAATGTTTCCTCCAACCCCCCTTTCTCCGGCACGCTTC

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000929 True 519 mRNA 0.45 3 9454157 9456101

Neighbor

gene id symbol gene type direction distance location
AMCG00000930 fmnl2,LOC107745270,LOC106581828 coding upstream 23101 9395618 ~ 9431056 (+)
AMCG00000927 NA coding upstream 95999 9294471 ~ 9358158 (+)
AMCG00000928 NA coding upstream 173138 9278194 ~ 9281019 (+)
AMCG00000924 NA coding upstream 421039 9032156 ~ 9033118 (+)
AMCG00000918 wnt10a,LOC107663825,LOC107562105,LOC107672309,LOC107560469 coding upstream 493373 8943842 ~ 8960784 (+)
AMCG00000935 NA coding downstream 62180 9518281 ~ 9553651 (+)
AMCG00000934 kcnj3 coding downstream 119960 9576061 ~ 9577701 (+)
AMCG00000936 kcnj3,LOC107671326,LOC107566749,LOC107567067,LOC107657376 coding downstream 160215 9616316 ~ 9616900 (+)
AMCG00000939 gpd2,LOC105019720,LOC106574870,LOC107660071,LOC106575774 coding downstream 377259 9833360 ~ 9867598 (+)
AMCG00000938 NA coding downstream 482106 9938207 ~ 9945452 (+)
G127278 NA non-coding upstream 76568 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 371276 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 814334 8638596 ~ 8639823 (+)
G127096 NA non-coding upstream 1159284 8294518 ~ 8294873 (+)
G127091 NA non-coding upstream 1164351 8288789 ~ 8289806 (+)
G127509 NA non-coding downstream 986892 10442993 ~ 10444937 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding downstream 2215667 11671768 ~ 11742750 (+)
G127924 NA non-coding downstream 2638040 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 3083980 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 3149938 12606039 ~ 12655172 (+)
G127134 NA other upstream 833962 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 3988176 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 7640000 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 7755584 1668845 ~ 1698573 (+)
AMCG00000723 crygs,LOC107756035,LOC107663530,LOC105911960,LOC103033891 other upstream 7848126 1599696 ~ 1606031 (+)
AMCG00000949 NA other downstream 644182 10100283 ~ 10154187 (+)
AMCG00001002 myo3b other downstream 2543563 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 2832849 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 5694174 15150275 ~ 15184392 (+)
G128823 NA other downstream 5953011 15409112 ~ 15420880 (+)

Expression


Co-expression Network