AMCG00000940


Basic Information

Item Value
gene id AMCG00000940
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 9945571 ~ 9949996 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000940
CTGGATCGAAGAGCCTTTTGGCAGGGTTGGGAAACATTGAGTTACTTTTCTATCAATCAGTCCTTCCCTTGTTACAAACAGGGTGGAAAACTCTTTCTTAGGATACAACAGAAGACATTTCAAATAAGGTCTTGTTTTTagatacaatatacaaaaataagcatTTGTTTATTCACCTAAGTTTTGTGTATTGGGGGAAGCGCTGCAGAAATGGCTGAAGTAATTGAAACAGCTTCCCCGATCGATCTGGAAGGAAATACAATTACCAAATGCCACTCACAGGTAGTCGAAATCATTGGGGGCATAGGGGATATCATTACGATCACTCAGCCTGAGAGTATAGAGGGTGAAATCACCGAGACGCTTCCTGAGGTGGCTGTTCCTGCATCCGAGGATGCTGCAGATACAAGCGCAGCTATCCCTGATTTTCAAGAAACTGTGGCAGAAGATGATTTTGAGGATGATGCCAACATAGGTGAACTAGCTTTGGAAGAGGGTGTTAATGTGGATGAGGGAACAACTGTCTTAGATGCTGATGCTGAGGGAACGGTAGACGCCAGTGAGACCAGCAATGAGGTGGATAGCTCGACTGCTGTCAGGGTCTCTCAAAATGTCGTTCCTCCAGCCGAGCCTGACACTATGAATACTACATCTGCAGAGCATCATGAAGACACTGCAACTGCCAACGATACTGGAAACACCACATTGGAGCCACTACCTGACACAAGGGTGCTTGGGTGTGATTTTGCACAGGTTTTTGATAATGAAGAAAACACATCCATTATAACACCAGATGTAAGTGCAGCTGCAACAGACACAAACATCAGCACATCTTGTCCTGTGGATCATGAAGACCAGGACGCAGAGAAGGACAGCACTGCTGACCTGCAAACACAGCCAGCGGTTGAGGAGAAGTCAAAGGAAGCTCCCGTGGCAATTCAAGATGTTAACGTAGCACAACAGGAAGAGACTGCTGCCTCCGAAGCCCCTTCCTCTAGCACAAATACAGAAGAGCAGGTGGAAGCTACAGCACCTGTGCCAGGAGAGGAGAAGGCAGTGATGCCAGCAGCTCCTGCCCCTATGATAAAGGAATGCCAGGTGAATGGGGAGAACGCAGGGGAGCCACAGTTGCCAATTCACGACACAGGAGTAAAGGGAGAAAAGCTGGAGGAGACAGACACCGCCTTAGAAGAGCTTCAGAATGAAAGCCAAGATGAGAATGATGAGACATCCTGGGATGGAACACAGCAAGAATACGGCTCCCAGGATTCCCAGAGCATGAGCCCGGTCCCGAGTTCGCAGTCCTCAGGAGACATATCGAGTGTTGGGAAGAAGCCTGACATTAACAAACACAACTACTCCAAGTACAACACCGTGTCCTATCGCAAAATCAGGAAAGGAAACACCAAGCAAAAAATTGACGAGTTTGAGTCCATGATGCATGTGTAAGCCTCAGGTGGTGAAATGGGCACGTGGTATCGCCTTTACCAGCCTCTGAGAGCTGGGATAGAATTAAAGGGCTCATTTAAGCCtatcaatatataatataaaagacCTTGGCTTACTTGTCAGGATCCTAAAATGATGGAAAAGGATTCAATTATTTcccaaatatttacattcaagGTGGCAATTTTCATTTCCGAGGCTATCGAAACTTGCTCTTCCTGTAAATACCAAAATTAGAAAGTGACCTTGTGACCTCTGGTGCACATGCAATAAGGGTTTAGATCAGAATACAATGTGGCTGAGgtcaagagaaaaacaaatgagacATTGTACAGTACCACCACTTTCCTGACTGCCCTCATAGAGAGGCCAAATAAGCTGGTAAAGGACTTATCATTTGCCATTTGGCAGTACACTCCTTAAAGGAACAGTTTATATCACACGCTTGCTTTGTTCTGCTGTTTCACTTGTTTAACCTGGAGACCTATGTTCTGTGAGATTTTCTGCTGTTGTTCCTGTTTagcttgaagaaaaaaacaactagaaATGAAGGAAGGAAGGCATATGTGTTGGTGAAGAGCTTGAGTACCTCTTAGAATAGATTTTTTAGAATAGTTTGAATGGTGACGTTTAAACAGAATCAAGAGTAAATCAAGCAGAACATAACAGAGACTGCAAAACTTCAAAtcacacaaacaatataaaagatATGAACTAatccttaattgttttattattagttggAAATACATGATTAATCAAATTAGATTCTCTGACGCCATTTCATATGCATGGGAAAGCTGAATTAGAGATGATTCTTAGCTTTTTTAAGAATTGCTAAAATGATTAGTGTAACTTTATTCTGAAAAATGACTCCAGTAACCTATTGAATTGTTAACAAATATGATATTTCAGCtgttcatttcagaaaaagtttaactggtttaattaaacatgtatgcTAAATACTGCTTTATTATACAGGACAAAGCTGATTATCATgtttaagattaaataatataataaggaGCTTAGATTCCAATAATCCTACTTACATGCCTTAAGACCAAGATACAAATTATCTGAAAGAGGCTGAACTCTCTTAACTTTAGTTCTTTACTCTgcaatacagtttaaaatcaaGCTTATTTTTCTATTGATCCTGTAATTACTATTTTTCAATATCATGGGACAAACCATGATAAAGAATAGTTTGCAGATGAGTTCCAGATGTGTCATATAAACAGCTGTAATGGTTTACATCTAAGTTGCCatccatgaaaaataaaaattactgTCAGCTGAATTTATTGATAAAGTACATGTTTTGCAAACAAAGCACATATAGCATAGACACATGGAAACTGTGTTCACAAAGCAAAAAAGCAGAAGGGAGCATTTTCTCAAAGAGCTTGcacaattaatattaatgaataagTTTCTAATTGTCATGGAATACCTGCAGTGTAAGTACATTTATATAACCACACGCATGATGTTTAAAACGTGTTCAGGGAGATATAAACAATGAGGAACTTAGTGTGTATTGTGTTCTGTTAGTTTAAACTATTTGAACAGTATATGGAGCAGGTCTTCTGACATGAATATCATTATGgttgtgaaaatataattgctTTTATTGAAGCTTCAGGTCATTTTTGTGATGATACCTTTCATTCTGGCTAAACACTATTTTATGACAAGAAATAAACCTCTGTTCTCCGTGTGCTCAGTGTTATGGAGTCAGTGAAACAACAACCGGGGATTAGACACAGTGGATAGTCTTGTAACATGAATAAACGCTCATCTTATTTCCGGAGTGCTCCTCTCCACACAATTGAGGTGACTGCTGCATGGATTGTTATAGTAGATATAACTATGATAATCAGCGATAAAAACTATAAGATATGATCAGAAGTTAAGATCAGAAATAGAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000940 True 3388 mRNA 0.40 3 9945571 9949996

Neighbor

gene id symbol gene type direction distance location
AMCG00000937 nr4a2,LOC106586168 coding downstream 122714 9816211 ~ 9822857 (-)
AMCG00000933 rprm coding downstream 431716 9507485 ~ 9513855 (-)
AMCG00000932 prpf40a coding downstream 491805 9432288 ~ 9453766 (-)
AMCG00000931 NA coding downstream 658095 9284104 ~ 9287476 (-)
AMCG00000925 kalrn,LOC106581831,LOC106586158 coding downstream 749008 9137815 ~ 9196563 (-)
AMCG00000942 NA coding upstream 5249 9955245 ~ 9960709 (-)
AMCG00000941 acvr1c,LOC106586171 coding upstream 18151 9968147 ~ 9974765 (-)
AMCG00000945 NA coding upstream 37137 9987133 ~ 9988508 (-)
AMCG00000944 acvr1 coding upstream 46360 9996356 ~ 10008828 (-)
AMCG00000943 NA coding upstream 106633 10056629 ~ 10076722 (-)
G127346 NA non-coding downstream 114881 9824796 ~ 9830690 (-)
G127337 LOC107575789 non-coding downstream 290928 9654330 ~ 9654643 (-)
G127325 NA non-coding downstream 388423 9550650 ~ 9557148 (-)
G127300 NA non-coding downstream 476695 9455971 ~ 9468876 (-)
G127291 NA non-coding downstream 537102 9408193 ~ 9408469 (-)
G127420 NA non-coding upstream 197779 10147775 ~ 10150934 (-)
G127478 NA non-coding upstream 441308 10391304 ~ 10395926 (-)
G127555 NA non-coding upstream 614931 10564927 ~ 10566649 (-)
G127573 NA non-coding upstream 665934 10615930 ~ 10616227 (-)
G127631 NA non-coding upstream 807874 10757870 ~ 10759494 (-)
G127292 NA other downstream 526246 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 2299849 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 3211754 6689568 ~ 6733817 (-)
G126700 NA other downstream 4372544 5572705 ~ 5573027 (-)
AMCG00000838 cacnb4,LOC108434427 other downstream 4962920 4957138 ~ 4982651 (-)
G127443 NA other upstream 324691 10274687 ~ 10278211 (-)
AMCG00000960 NA other upstream 746860 10696856 ~ 10700364 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 2747181 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 2775698 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 2782188 12732184 ~ 12751516 (-)

Expression


Co-expression Network