AMCG00000952 (march7,LOC107584818)


Basic Information

Item Value
gene id AMCG00000952
gene name march7,LOC107584818
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 10381773 ~ 10391810 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000952
ATGAACGCAAAGTACAATGATGGCCTACTGGGGACAtttACAGAGATGGATTCGAAACCAAGAAGGCTGCCTTTCATGCCATCTAGCTCTTCATCTtcgtcctcttcctcctccccgtCCTCAGTCTCCTCACCTCTGGGCTCCAGCAGGCTGTACTCAGGCAGGGCCAATGTGCTGAGTAGCGAGCGATACTCCAGAGGCACCCCTGTCAAACTGGAGTCAGAGTACCAGAGCTCCAGGTTCCACAGCTCCTCCAGAGATTACAGCTTTCCAGAAAGCCGCCATTCCAGCTGGAAACTTTCTTCTCCATCTTTGACACCAGCTTCTACATCATATGATCGCTCCTGGTCTGACACCTCTGTAGGAACCAGGAGTAAACTGTTGAGTCATCAGGGTGAATCTGAAAGACGGCAAGGAACCTACTGCGGGCTCCTCAGTGCATCCCAAGATACTGATTCTAAAAGGCCGAAGCTGTCCTACACAAACCGAGCAACATACTCGAGAAGCGCGTCTTCGTCTGGAGTGAACAGTAGCTACAGTGGCATTGGGAGCATTTCAGATTCTTCATGGAAGTACAGCCCGGTTTCCAGATCGTCGTCATCCTCCTCATCCTCGGAGTCCCTTCGCTCTAGGCGAGAGCTAGATAAGAGAGCCGAGGCCAGTCTCTCCAGCTATGGAGACCACAGCCGCAGGAATGGAGGTTTACTTTCCTCATCATTGGTGAATCGTTCTACAAGTCATCATATGACATCTGATTACGAGCGGTCGTTATTATACAGAGATACATGTAGGAACGCTTCTAGGTCTTCTAGTTCTGTGTCCTCAAAAGATCAAGAATCTCCTCAGCCAACCGTGGCACCGGAGTCCAGGAACGCCTCTTCAAGGTCTTGTGCTTGGTATATACCACTCTCTGAACGGACCACTACTACACCTCCGAGCCCCCCTCAAAGGCAATCCACCGAGACCAGTGATTCAGATGGTAGACGGACAACCAGACAGTTACTGTCACGCCTGGCCTGCAGCATGTCCTCCACATTCTTTTCTAGAAGGTCAAGCCAGGATTCTTCAGGTTCAAGTTCAAGGTCTTTTGAATCATCCACAGAAGAGGCATATGATGTCCCAAGAGCTGAAAATTCTTCCCAAAGTAGTGATAGCAGGAACAGCAGCCCTGAGGTTTCGGAGAGAAGAGCTACAGATTCCTCTCAAGGCTTCACGTTTCTGAGACGAAGACGGCAAGGTTTACCTCCTGTACTAGAAACGCGCAATACCGAATCGGTGCCAGAAACCTCAAGATCCGCTAGTGCTGAAAACCGAAGCTCTGGCTCCTGGCTCTCGTCTTCATTTAGAAACCGTTGCACCCCACTGTTCTCCCGGAGGAGAAGAGAAGGCAGGGACGAGACTGCCCGAATGGCATCCAGCTCAGATGAGATGTATGGAGAGTCTCAAGGTCTTTGGAGTAGAAGGGAGTCCTGTGAAAGCAAAGCCTCTGGTGGGGATCAAGATGAAGAATCTCAAGGTGCTGGAGCATCTGCTTCCCCCGCGGCGGCCGAGTCCAGCACTCCTGCCCACGATGCTTCCCCGGCGGGGCGGAATCCGCGACTCTCTGGAATCGTTCCGAACTCGTTGTTTCGCCTCGCCATGCCTTCCACGTTGGAAAGCACCTTGCCTGATAATGTTATGATAACTGTCGACATCATGGCCGCTGGTAGAACTCAACCTGATGGACAGGAAAGTGGCAAGTCTGTTCCTTCGAGAGACCCAGAGAAGCTGAAGAAAATCCAGGAGAGCCTCCTTTTAGAAGAGTCCGACGATGAGGAGGGAGACCTGTGCCGCATTTGCCAAATGGGGACTGAAACCCCGTCAAATCCGCTGATCGAGCCCTGCAGGTGCACTGGCAGTTTGCAGTATGTTCATCAGGACTGTATGAAAAAGTGGCTGCGATCCAAAATTAACTCGGGTTCGAACTTGGAAGCTATAACTACCTGTGAGCTTTGTAAAGAGAAGCTGCATCTTAACATTGAAAATTTTGACATCAATGAGTTGTACAGAACACATGCAAGTGAAAGGgCAGAGTATGAGTTTATCAGCTGTGGCCTTTACCTTGTCGTCCTGCTGCATTTGTGTGAGCAGCGTTTTTCGGATGTGTTGGGTGCTGCCAATGATGCCGGGTTTTTCAACCTAGCAAGAACCCTTCATGAGCACATGGATGATCTTGAA

Function

symbol description
march7 E3 ubiquitin-protein ligase MARCH7

NR:

description
March7 protein

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K10662 MARCH7, AXOT; E3 ubiquitin-protein ligase MARCH7

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000952 True 2217 mRNA 0.51 10 10381773 10391810

Neighbor

gene id symbol gene type direction distance location
AMCG00000947 tanc1 coding upstream 103562 10201657 ~ 10278211 (+)
AMCG00000946 NA coding upstream 340725 10036674 ~ 10041048 (+)
AMCG00000948 NA coding upstream 346065 10024288 ~ 10035708 (+)
AMCG00000938 NA coding upstream 436321 9938207 ~ 9945452 (+)
AMCG00000939 gpd2,LOC105019720,LOC106574870,LOC107660071,LOC106575774 coding upstream 514175 9833360 ~ 9867598 (+)
AMCG00000959 NA coding downstream 168746 10560556 ~ 10570905 (+)
AMCG00000957 psmd14,psde,LOC107563735 coding downstream 187990 10579800 ~ 10603207 (+)
AMCG00000958 tbr1,tbr1b,LOC105022444,LOC106586185 coding downstream 213858 10605668 ~ 10611409 (+)
AMCG00000967 slc4a10 coding downstream 257802 10649612 ~ 10680286 (+)
AMCG00000966 gran,gca,LOC108242177,LOC106575298 coding downstream 361276 10753086 ~ 10759497 (+)
G127278 NA non-coding upstream 1004184 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 1298892 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 1741950 8638596 ~ 8639823 (+)
G127096 NA non-coding upstream 2086900 8294518 ~ 8294873 (+)
G127091 NA non-coding upstream 2091967 8288789 ~ 8289806 (+)
G127509 NA non-coding downstream 51183 10442993 ~ 10444937 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding downstream 1279958 11671768 ~ 11742750 (+)
G127924 NA non-coding downstream 1702331 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 2148271 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 2214229 12606039 ~ 12655172 (+)
AMCG00000949 NA other upstream 227586 10100283 ~ 10154187 (+)
G127134 NA other upstream 1761578 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 4915792 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 8567616 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 8683200 1668845 ~ 1698573 (+)
AMCG00001002 myo3b other downstream 1607854 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 1897140 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 4758465 15150275 ~ 15184392 (+)
G128823 NA other downstream 5017302 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 5068722 15460532 ~ 15463853 (+)

Expression


Co-expression Network