AMCG00000968


Basic Information

Item Value
gene id AMCG00000968
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 10931552 ~ 10933795 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000968
ATGCAGTGGACCCCAGAGCATGCACAGTGGGCAGAACAGCACTTTGACATCACCTCAACTACCCGCTCTCCAGCACACAAAGCAGAGGCATACCGGGGCCATTTACAACGTACCTATCAGTACGCCTGGGCCAACGATGACATTTCTGCACTGACTGCCTCAAACctgttgaaaaaatatgcaGAGAAGTACTCTGGAATTTTAGAAGGTCCCAACGAAAGGGCACTACTAAGTTCTTACTCTGACGGTGCTCCGGGTCTTTTGAACGGAAGGAAGATTGAAAACGATTCCTGGCAGCCTTCTATAAACTCAGACGGGGTTTATCCTATGAACTGTGTTCCAGATGTTATTTCTGCAAGTAAAGCTGGAGTGACAACTGCCCTACCTACAGCAGATGTCTCTGCCAGCATTGGCAGTTCTCCAGGGGTAGCCAGCAATTTGACGGAGCCCAGTTATTCCAACAGCAACTGCGGAAGTCACACAGTAGCCAGTCTTCATTCGGGACTCCCGTCTCAGGAATATGCCACTGGTTACAACGGCTCTTATCTGCATTCCAGTTATAGTGGGCAGTCAGCACCTGCCCTTCCTTCGCCTCATCCGTCACCTTTGCACAGCTCTGGACTTTTGCAGCCACCgcctccaccccctccccctacTCTGGTACCAGGCTACAACACTGGGTCTCCCAACCTATCCAGCTACAATTACCCATCTACTGGCTATCCTCCACAAACTGCTGTTGCCCCCGGTTATAGCCCTGGGGGGGCACCCCCTCCTTCTGCTTATTTACCATCGGGCATCCCGGCACCtacacccctccctccctccactgTCCCGGGTTACACCTATCAGTCCCATAACCTTGCACCAATTGCACCCACCCCTCTGAACAGCAGTTCAGCCAATTctctgaaaagaaaagctttcTATATGACAGGGCAAGCAGAAATGGACTCCAGTTATGGAAATTTCAGCTACAGCCAACAGCGCTCTTCTCAGAGCCCTATGTATAGAATGCCAGACAACAGCATTTCAAACACAAGCAGAGGGAATGGATTTGACAGAAATGCTGAGACGTCATCTTTAGCATTTAAGCCTACGAAGCAGCTGATGTCCTCTGAGCAGCAAAGAAAATTTAGCAGTCAGTCTAGCAGGGCGCTAACCCCTCCATCCTATAGTTCTGCAAAAAGCTCCTTGGGAGGTTCACGATCAAGTGAGCCATTTGGGAAATTCTCGTCTCCTGTAATGAGTGAGCATAGTGATGAGCACAGACAGCATCTTTCCCACCCAATGCCTGGATCGGGAATTGGCACAGCTACCTCATCCACCCGTCCTGCTGAAGAACAACTGAAGAACACTGACCCACACCTTGTGGAACTTGTGACCAATGAGATCATCAACCAGGGACCTCCCGTGGACTGGAGTGATATTGCTGGTCTGGATCTGGCCAAAGCTACAATAAAAGAGGAGGTTTTATGGCCTATGCTGAGGCCCGATGTGTTCAGCGGAGTCTCTGCGTTACCTCGGAGCATTCTTTTATTTGGACCTCAGGGAACAGGCAGAATGTTATTGGGCAGGTGCATAGCCAGTCAGCTGGGGGCTGCGTTTTTTAGGATCAGCGGCTCTGCCTTGGTGACAAAGTGGCtaggagaaggagagaaggtTGTCCATGCCTCTTTTCTGGTAGCACGATGTCGTCAGCCTTCTGTGATTTTCATCAGTGAGATTGACATGCTGCTTTCATCACAGCTGAGCGAGGAGAGCCcaataaacagaattaaaactgAACTCCTCATGCAGTTAGACAGTATTCTGACCTCTGCCGAGGACCAAATTGTAGTCATCTGCTCCACAAGTAAACCTGAGGAAATAGATGAGTCGATGAGAAGATACTTCATGAAACGACTTCTCATCCCATTACCTGACAGCACAGCAAGGCACCAGATAATCATTCAACTGCTCTCACAGCACAACTATTGCCTCAACGACAAAGAGGTTGCACTGCTCGTTCAGCGGACGGAAGGCTTCTCCGGACTTGATGTTGCCAGATTGTGTCAAGAAGCGATGGTTGGCCCTCTCCATGCCATGCAGGGCACTGACCTTTCAGCCATTATGCCTAGCCAGTTGAGGCCAGTCACTTATCAagactttgaaaatgttttttgcaaAATTCAGCCTAGTATATCACAGAAAGAACTTGACACATACACTGAATGGAACAAAATGTTTGGTTGTAGCCAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000968 True 2244 mRNA 0.49 1 10931552 10933795

Neighbor

gene id symbol gene type direction distance location
AMCG00000965 LOC107600684,LOC107677922,LOC107087272 coding downstream 89854 10840113 ~ 10841698 (-)
AMCG00000964 NA coding downstream 123731 10762970 ~ 10807821 (-)
AMCG00000963 NA coding downstream 179484 10749030 ~ 10752068 (-)
AMCG00000962 NA coding downstream 194276 10725849 ~ 10737276 (-)
AMCG00000961 NA coding downstream 207670 10702960 ~ 10723882 (-)
AMCG00000970 NA coding upstream 143317 11077112 ~ 11100449 (-)
AMCG00000969 NA coding upstream 201929 11135724 ~ 11155356 (-)
AMCG00000971 NA coding upstream 248137 11181932 ~ 11190201 (-)
AMCG00000977 csrnp3,LOC107677900 coding upstream 368532 11302327 ~ 11310013 (-)
AMCG00000978 NA coding upstream 584716 11518511 ~ 11521717 (-)
G127631 NA non-coding downstream 172058 10757870 ~ 10759494 (-)
G127573 NA non-coding downstream 315325 10615930 ~ 10616227 (-)
G127555 NA non-coding downstream 364903 10564927 ~ 10566649 (-)
G127478 NA non-coding downstream 535626 10391304 ~ 10395926 (-)
G127420 NA non-coding downstream 780618 10147775 ~ 10150934 (-)
G127678 NA non-coding upstream 274746 11208541 ~ 11247944 (-)
G127718 NA non-coding upstream 462915 11396710 ~ 11407860 (-)
G127740 NA non-coding upstream 672009 11605804 ~ 11606176 (-)
G127742 NA non-coding upstream 675476 11609271 ~ 11609630 (-)
G127743 NA non-coding upstream 676448 11610243 ~ 11611612 (-)
AMCG00000960 NA other downstream 231188 10696856 ~ 10700364 (-)
G127443 NA other downstream 653341 10274687 ~ 10278211 (-)
G127292 NA other downstream 1512227 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 3285830 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 4197735 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 1763382 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 1791899 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 1798389 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 2423188 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 2833746 13767541 ~ 13773878 (-)

Expression


Co-expression Network