AMCG00000969


Basic Information

Item Value
gene id AMCG00000969
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11135724 ~ 11155356 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000969
gtttttctccctgGTAGAAGAACCAAAGGGAaagctcctcttcctccttcacCCATAACAAAGTCTTTTGATGGTTCAAGATTTTCACCGACCAGGGAACATCCAAACGTAGCCATGGATCAGAAGGAGAACTTGATTGACAAAGACATCTCTCTGACAGTGGTCCTGCCAGGGGGTACAGAGAAGACTGCGACTGTGCATGGGAGCAAGCCAATGATGGACTTATTAATTATGCTGTGTGGGAAATATCATCTGAATCCATCGAGCCACACCATTGAGCTGGTCTCAACCAACAGAAACCAAATCAAGTTTAAACCAAACGCTTTAATAGGAGCGCTGGATGCAGAAAAGATTATATTAAAACCCAAAGGCGGTGatgaaaggaacaaaaaggCTGCACCTCAAATGCCTGAGGCTACAGTCCGTCTTGTAATAAACTATAAAAAGACTCAGAAAACAATTTTAAGAGTTAACCCTCGGGTTCCCCTTGAAGAGTTGATTCCTGCAGTTagtgaaaaatgtgaatttgatCCCAAGAGCACAGTGTTACTGAAAGATGTACACTCACAGGACCCACTGGACTTGTCAAAATCTCTCAACGATCATGGTATAAGAGAAGTGTATGCAAGGGACACTAAAGaAGATAAAAGTTCACCAACTAAAGATAAAACACTGaaggacaaagaaaacaaaggccTTTTCAGTATATTCAGAAGAAGTAAGAAGAAATCTGAAcaggCTACAACTGTAAGCGCTCCAGCATCACCAACCTTAAGCCAACAGAGACCTGGGAGCATGTGCTCCCTAAGTGCCAATGCCACTACTTACAGTTCAAACACACTGCCATCTGAGATGCCAAAGAAAAGGCGGGCCCCCCTGCCTCCAATGGTTGTGTCACAGAGTTTCCCAACCAACCTGAGTGAAGGTCAGACTGACCCTCAGCCAGATGCGCTTCCTGAAAGTGATCAGGATTTACCAGGGCTTACCAGAGGGTCATCCTCAGAATCATCCTTGAAAAGAACCAAAAGGAAAGCCCCAGCCCCCCCGTCCTCACCATGTAAAATCACACAAGATGAGACGGAACAGGACAGTAACATTAAAGCTGGGCTAGTCACGCAGTGTACCCTTGAAGGAATAACTGAAAAAGAAGAGATGGCTGTCTCAGCCACACAGGATGCCACTATTGCTGCGGCAACCCAAGAGGGAGAGCAGAGCCCCCCCATGTCCGCTGATATACCGGCAGACCCTGGCAACACTGAGCCCAATTTATTGCCTGTTGACGTCGAGATGAAGAGTGTATCTAATGGCACAAAGGAAGATGAATTGAATGATGTGTCCACAGATGGCAAGCAAGCTGTTGACCTTATAAATAAGGAGGAGTGCAGCCAACAAACACTGAAAGTCACTGAGGATTGTGTTACTGCTGATTTGGATCACACAGAAAAGGGTGATTTGAGACCTGCTGAACAAATGAAAGTGCAAGAAAGGACATCAGGTGACAAGGTTGTATCATTAGATGGAGGCAAGAAGGAATGCAACGCTGAAGTGTCTGTAGCTCTGCAAAGTGCACCTGTGAACTCGACTAGTTCTCAGACCCCAAAGGTTAAGCCTGTAATGCAGGATGCAGCTATACAGGCATCAGATTTAATTAACATGGGATGCACTGTCAAGGAAGAGAGTGATAAAGTGGAAACTGAAGGGGACTACAGTGCAATGAATTCACAAGGTGGAGATCTTCAGGGCCAAAATGCAATTAAAGCACATCTGGAATCTTCAGTAGAAAATCAAGATGCATCTGCTTTAGCTGAACTCTCTTCAAGTGAACAAGGTGTGCTAAAAAAGGACATGGCAACATCCACCGAGGAATTGGACTCGAGAGAAAGTGAAAATACATTACCTCAGGCATTAGAAGTGTCCTCTGAATTCCAAGATACACTTGCAACACAGACCCCTCTGATTTACAAGAAGGACTGTGAGCCTAAACCAAAGCCTTCTAATGAGGTCACAAGAGATTATATACCAAAGGTAGGACTGACAACTTACAAAATTGTGCCTCAGAAGTCTTTGGAGAAGCTCAAGTTCTTTGAGGTCCAGTTAACTTTGGAGGTGCCAGATGGGACCGTGGATCAGGAGGCATCCTATAAATCACCTGAGCATTTAGACATTCGCTTACATACCAAAGTGCCACAAGACTCAGTGGTTCAGCGATCTGCTGACTCAGATGAAATCCATCCTTATGAATCCAGTAGTGTTTCTGGAGTGAACAACACGACTGCTAACAGCAATCACACTGCCAGTAATAACATCGCGCCAGTTCTGTCCCCTCATTCAAGTGTAATTTCTGAAGGAGCATCAAAAGAAACCAAGCCTTTTTCTCTGTCTGATGTGGGCAGACTGCCATCTTTAACATCACCTTTAAGAGAAAAGAAAGTTCCACCTGCAACTAAACCTAAACCTGGATCTTTCCGCTTGCCCCAGCATAAAAGAACAGCTGGGGATTATGTAACTTCAGCAGCTTTTAGAAGTGGGAGTACAAGTTCTGTCTCTAGTCAAAGTGAGATTTCTGGGAGCCCTGGAAAAGAGCAAGAAATACGGTCTGAAAAGCTTTTTGAAGACGAAGAAGAAAACGTTtttcctccacctcctccaccagTAATGTTTGAAGAAACATCAGAAGGAAGAATCCGGGAACAGGGAAAGCCTGGCAGTCAGACAGCAGACATCCCGGGGATGGCCACTAAGTTTTCAAGGCAAATGAGTCTTCCAAATAAACAACCTGCAGGATTAAGTTTTGAAAAATTCAGAAGTTTTGCTGCTCCAAAACCTTATACCTCTACAGCCCCATCCCCCTTTGCTCTTGCTGTGTCTTCAGCAGTTAAGCGATCTCATTCATTCAGTCGAGGGTCTACAGGTCATGGTCTCCCTTCTCGAGGATTGCCTACTTCATCTTTTTCTGAAAGGTTCGCTACTAAGGAGCTGAAGGAACCTGCACAACCTTTAGTGGAATCTTCGGTTCCTGGTGCTTCAGATGCAATGTCTGTAAATGGAAGCTCAACAGGGCTTCTGCCTTCAAAAACAGAGTAAATGTGCGTGTAATTATTTGATGGATTACTTTCACCTCATGCTTTCTTAAAGACCTTGGATCAGAAGGTACTCTAGCATTCAACAAAACTTACATGAAAATGAGTGGATGGACTTTAGCTTCCAGTggagtgactttttttttttttttccctatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000969 True 3239 mRNA 0.44 10 11135724 11155356

Neighbor

gene id symbol gene type direction distance location
AMCG00000970 NA coding downstream 35275 11077112 ~ 11100449 (-)
AMCG00000968 NA coding downstream 201929 10931552 ~ 10933795 (-)
AMCG00000965 LOC107600684,LOC107677922,LOC107087272 coding downstream 294026 10840113 ~ 10841698 (-)
AMCG00000964 NA coding downstream 327903 10762970 ~ 10807821 (-)
AMCG00000963 NA coding downstream 383656 10749030 ~ 10752068 (-)
AMCG00000971 NA coding upstream 26576 11181932 ~ 11190201 (-)
AMCG00000977 csrnp3,LOC107677900 coding upstream 146971 11302327 ~ 11310013 (-)
AMCG00000978 NA coding upstream 363155 11518511 ~ 11521717 (-)
AMCG00000979 stk39,LOC106586202 coding upstream 383129 11538485 ~ 11556121 (-)
AMCG00000988 NA coding upstream 456547 11611903 ~ 11614988 (-)
G127631 NA non-coding downstream 376230 10757870 ~ 10759494 (-)
G127573 NA non-coding downstream 519497 10615930 ~ 10616227 (-)
G127555 NA non-coding downstream 569075 10564927 ~ 10566649 (-)
G127478 NA non-coding downstream 739798 10391304 ~ 10395926 (-)
G127420 NA non-coding downstream 984790 10147775 ~ 10150934 (-)
G127678 NA non-coding upstream 53185 11208541 ~ 11247944 (-)
G127718 NA non-coding upstream 241354 11396710 ~ 11407860 (-)
G127740 NA non-coding upstream 450448 11605804 ~ 11606176 (-)
G127742 NA non-coding upstream 453915 11609271 ~ 11609630 (-)
G127743 NA non-coding upstream 454887 11610243 ~ 11611612 (-)
AMCG00000960 NA other downstream 435360 10696856 ~ 10700364 (-)
G127443 NA other downstream 857513 10274687 ~ 10278211 (-)
G127292 NA other downstream 1716399 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 3490002 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 4401907 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 1541821 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 1570338 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 1576828 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 2201627 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 2612185 13767541 ~ 13773878 (-)

Expression


Co-expression Network