AMCG00000971


Basic Information

Item Value
gene id AMCG00000971
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11181932 ~ 11190201 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000971
GCGGCCGCTGCCTGATCAGGTCAGCAGTGATTTCAACCATCTTCCTGtaatctgttttattaaactttcttattttcagcTGAGATGGATAAGGACACGCACACTGACATCTACTTACAGAGGAGTTTTCAAGAAGCAGAAAGCGATGACAGGAAAGCGCTGGTGTCTCGCAGACAGAAGGGTGGAAAAAGCAGCCTGTCTTCTGccagttttaattttatcaATTCAATCATTGGATCTGGGATCATAGATTATTCAATCATCTTGATGATAAAAAGTGGAAATTTGTCTGGGACCAGGACTTACCAGTCACTAGTTAATAAATCACTTGGCTTTATTGGATATTGTATTCTGTCAGTACTGCAATTTTTATATCCTTTAATTGCTATGATCAGTTACAATATCACCACTGGGGATACCCTAACCAAGGTGTTTCAAAGAATACCGGGAGtCGGCCCAGAGCACATACTTGCAGACCGTCAGTTTGTTATTCTGCTAACAAGCATTTTATGCACACTTCCTTTGTCACTTTACCGGAACATATCCAAGCTGGGGAAGgtctCCTTGCTCTCTGTCCTGTTCACTCTTGTAATTCTTGTCATCGTTATTATAAGAGCAACAACACTTGGACCACAAATACCTCCTACAGAAGACGCATGGACGTTTGCACAGTTTAATGCAATTCAGGCGGTTGGGGTCATGTCTTTTGCGTTTATATGCAATCACAACAGCTTTCTGATTTACGGCTCTCTTGAAGAACCTACCATCAGCAACTGGTCCCGTGTCACTCACGTGTCGGTCCTCTTTGCTTTCGTTATCAGTGCGGCCTTTGCATCATCTGGGTATTATACCTTTACTGGAAACACGCAAGGTGACATATTTGAAAACTATTGCAAAAATGACAATCTGGCAACATTTGGAAGGTTCTGCTATGGGATCAGTATTATTCTGACTTTTCCTATTGAATGTTTTGTAACACGGGAGGTGGTAGCCAACCTTTTTTTCAGTGGGACTCTTACAACTCTTGCACATGTTTTCCTGACTTTGGTTATAATCACAATATCTACAGCTGTATCCCTAGCTTACGACTGCCTTGGAATCGTTTTAGAATTAAATGGAGTTCTGAGTGCTACCCCGCTTGTTTTTATCATCCCAGCAGCATGCTATCTTAAGCTGTCTGATGAGCGTTGGTATCACCGAGATTACCTTATTTCCTGTTTGATTCTTGTTACTGGTGTATTTGTAATGACTGTGGGTTTAGCCATGACTATTATGTACCCCCAAGATTGCTCACATGGAAAAGAACCATTTTACTGTTTGTCCTTCAATTCGACGCCGTCCACCAATGTGACAGATGATCAGATTCCAGTCTGGAATGCAAGCCTCTTTTAAAGAAGAACCCAAGATATGCTGAGGCATTCACTGccaagtgtatttaaatatgtatcttttGGGGTTGTACCCATAGTGATATGCACTAAGCATTAATGTTTAGTATTGTTTCAAAGGCAGATTTGTTACTAGGGCATCATTGGTTATGCTTTTTGTCACTTGTTTACATATggatatataaatgcattgttgac

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K14997 SLC38A11; solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000971 True 1586 mRNA 0.41 11 11181932 11190201

Neighbor

gene id symbol gene type direction distance location
AMCG00000969 NA coding downstream 26576 11135724 ~ 11155356 (-)
AMCG00000970 NA coding downstream 81483 11077112 ~ 11100449 (-)
AMCG00000968 NA coding downstream 248137 10931552 ~ 10933795 (-)
AMCG00000965 LOC107600684,LOC107677922,LOC107087272 coding downstream 340234 10840113 ~ 10841698 (-)
AMCG00000964 NA coding downstream 374111 10762970 ~ 10807821 (-)
AMCG00000977 csrnp3,LOC107677900 coding upstream 112126 11302327 ~ 11310013 (-)
AMCG00000978 NA coding upstream 328310 11518511 ~ 11521717 (-)
AMCG00000979 stk39,LOC106586202 coding upstream 348284 11538485 ~ 11556121 (-)
AMCG00000988 NA coding upstream 421702 11611903 ~ 11614988 (-)
AMCG00000987 abcb11b,abcb11,LOC105911976,LOC107692229,LOC107602798,LOC108438644,LOC108270741 coding upstream 434890 11625091 ~ 11655006 (-)
G127631 NA non-coding downstream 422438 10757870 ~ 10759494 (-)
G127573 NA non-coding downstream 565705 10615930 ~ 10616227 (-)
G127555 NA non-coding downstream 615283 10564927 ~ 10566649 (-)
G127478 NA non-coding downstream 786006 10391304 ~ 10395926 (-)
G127420 NA non-coding downstream 1030998 10147775 ~ 10150934 (-)
G127678 NA non-coding upstream 18340 11208541 ~ 11247944 (-)
G127718 NA non-coding upstream 206509 11396710 ~ 11407860 (-)
G127740 NA non-coding upstream 415603 11605804 ~ 11606176 (-)
G127742 NA non-coding upstream 419070 11609271 ~ 11609630 (-)
G127743 NA non-coding upstream 420042 11610243 ~ 11611612 (-)
AMCG00000960 NA other downstream 481568 10696856 ~ 10700364 (-)
G127443 NA other downstream 903721 10274687 ~ 10278211 (-)
G127292 NA other downstream 1762607 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 3536210 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 4448115 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 1506976 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 1535493 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 1541983 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 2166782 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 2577340 13767541 ~ 13773878 (-)

Expression


Co-expression Network