Item | Value |
---|---|
gene id | AMCG00000980 |
gene name | NA |
gene type | coding |
species | bowfin (Amia calva) |
category of species | ecological fish |
Item | Value |
---|---|
chromosome id | CM030137.1 |
NCBI id | CM030137.1 |
chromosome length | 27060302 |
location | 11396887 ~ 11410209 (+) |
genome version | AmiCal1_2021_bowfin_Genome |
id | name | namespace |
---|---|---|
GO:0009123 | nucleoside monophosphate metabolic process | biological_process |
GO:0009124 | nucleoside monophosphate biosynthetic process | biological_process |
GO:0009126 | purine nucleoside monophosphate metabolic process | biological_process |
GO:0009127 | purine nucleoside monophosphate biosynthetic process | biological_process |
GO:0009156 | ribonucleoside monophosphate biosynthetic process | biological_process |
GO:0009161 | ribonucleoside monophosphate metabolic process | biological_process |
GO:0009167 | purine ribonucleoside monophosphate metabolic process | biological_process |
GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | biological_process |
GO:1990351 | transporter complex | cellular_component |
GO:0034702 | ion channel complex | cellular_component |
GO:0034703 | cation channel complex | cellular_component |
GO:0034704 | calcium channel complex | cellular_component |
GO:0005891 | voltage-gated calcium channel complex | cellular_component |
GO:1902495 | transmembrane transporter complex | cellular_component |
id | description |
---|---|
ko04020 | Calcium signaling pathway |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
AMCG00000980 | True | 11664 | mRNA | 0.40 | 3 | 11396887 | 11410209 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
AMCG00000986 | NA | coding | upstream | 3555 | 11378983 ~ 11393332 (+) |
AMCG00000972 | NA | coding | upstream | 93763 | 11286495 ~ 11303124 (+) |
AMCG00000973 | NA | coding | upstream | 113206 | 11259400 ~ 11283681 (+) |
AMCG00000976 | NA | coding | upstream | 143664 | 11242598 ~ 11253223 (+) |
AMCG00000974 | scn1lab,LOC107706643,LOC107581364,LOC107705566,LOC107677574 | coding | upstream | 154504 | 11213271 ~ 11242383 (+) |
AMCG00000989 | b3galt1,LOC106586201,LOC106581793,LOC106575305 | coding | downstream | 98539 | 11508748 ~ 11509983 (+) |
AMCG00000981 | cers6 | coding | downstream | 148532 | 11558741 ~ 11597550 (+) |
AMCG00000982 | NA | coding | downstream | 190059 | 11600268 ~ 11611654 (+) |
AMCG00000984 | NA | coding | downstream | 210049 | 11620258 ~ 11622636 (+) |
AMCG00000985 | NA | coding | downstream | 246444 | 11656653 ~ 11662646 (+) |
G127509 | NA | non-coding | upstream | 951950 | 10442993 ~ 10444937 (+) |
G127278 | NA | non-coding | upstream | 2019298 | 9363107 ~ 9377589 (+) |
G127206 | NA | non-coding | upstream | 2314006 | 9081327 ~ 9082881 (+) |
G127144 | NA | non-coding | upstream | 2757064 | 8638596 ~ 8639823 (+) |
G127096 | NA | non-coding | upstream | 3102014 | 8294518 ~ 8294873 (+) |
G127774 | atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 | non-coding | downstream | 261559 | 11671768 ~ 11742750 (+) |
G127924 | NA | non-coding | downstream | 683932 | 12094141 ~ 12096863 (+) |
G128074 | LOC103479331,LOC106632289,LOC101486364 | non-coding | downstream | 1129872 | 12540081 ~ 12540318 (+) |
G128101 | NA | non-coding | downstream | 1195830 | 12606039 ~ 12655172 (+) |
G128107 | ola1,LOC107660044 | non-coding | downstream | 1228776 | 12638985 ~ 12676174 (+) |
AMCG00000949 | NA | other | upstream | 1242700 | 10100283 ~ 10154187 (+) |
G127134 | NA | other | upstream | 2776692 | 8617199 ~ 8620195 (+) |
AMCG00000848 | NA | other | upstream | 5930906 | 5461301 ~ 5465981 (+) |
AMCG00000734 | NA | other | upstream | 9582730 | 1805407 ~ 1814157 (+) |
AMCG00000729 | satb2,LOC107690605,LOC107569722 | other | upstream | 9698314 | 1668845 ~ 1698573 (+) |
AMCG00001002 | myo3b | other | downstream | 589455 | 11999664 ~ 12011425 (+) |
AMCG00001022 | NA | other | downstream | 878741 | 12288950 ~ 12385042 (+) |
AMCG00001098 | NA | other | downstream | 3740066 | 15150275 ~ 15184392 (+) |
G128823 | NA | other | downstream | 3998903 | 15409112 ~ 15420880 (+) |
AMCG00001114 | NA | other | downstream | 4050323 | 15460532 ~ 15463853 (+) |