AMCG00000990


Basic Information

Item Value
gene id AMCG00000990
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11737469 ~ 11740984 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000990
CCCAGGGCGGCCGCCGTAAGAGTGTTACTATGAGCAACAGCAGAAGCGCCCGTCCGCAGATCAACAGGCGCACTGTACGGCACGGCACTGTACGGCAGCGGCTGTGTCTCCGCTATCAGAGCATCTGCACAATAAAACCAGCAAAAACAACACCTGCAGCATGACATCCCCGCAGCGGACTCCCAGAGACCTGAAACAGATGATCACCGACACCAAACAGCTTCGAGGACTGTCCCAGGACGACAAGACCGAAAACGCCCTGCTGAGATCCAGGATCGATGAGCAGTCCAATCTTATCTGTATCTTGAAGCAGAGAGCGGACGAAATGCTCCTGCGCTGCCAGGCCCTGGAGAGGATAAACAGTGAACTGGAAAGCCTGAGAGAGGATGTCCAGAAAGAGCTGGAGAACGAGAGGAAGCGCTCCTCCCAGCTGGAGCAGAGGTTTCTGGACCTGGCGGCCAACCACCAAGAGCTCATCAACTTCAAGGATgagtacaaaaaacaaaatggacagCTAAGAGAGGAGAACCAACAGCTCCAGGAAGAGAACGAGAACCTCTTCAGTAAAGAGCTGCATGAGAAAGAGGAGGTGATCCTAAAGCTCACCCAGGAATTAAAGGACCTGGCTGAACAACACAAGATCCTGGAGATCGAATATAAGGAAAAGTCAAGTGGCTTCCAGACCAAGCTGAAGGAACTCATGATAATCCACCAAACTAAAGAAGCTTCTTTACAGGGGGAATTGCAGATTACTCAGAAACAGTTAAAGGATGCTGTGGACATGTGCACCGAACTGGATTTACAACTCAGACGAGCAATGGACAAGGATGCCTTTGAAGAGTCTCAGCTGCAACAGAAATTAGAAGCTTTGGTGAAGGAGAAAGATGAACTTCTGGATCTGTCGATGCAAAGGGGGAAAATTATACAGGATAAACAGAAAGAGATACAGGAGCTAGAGGAAAAAAGACAGGAGGCAGAAAAAGCAAGAGTAACTGCAGAAGAACGGTTTgagaaagcagcagcagaagtgGATGCAAACTTGAAAGTTCAAGATCTTCAGCGTTGCCTTGATGAATCTGAACAATCATACAATGAGCTAAAGAAGGATTTTGAAGCCTataaaaaacacagcagtgacCTTCTTGCAAAGGAAAAGGAGTTAAATGCCAAACTACGCCACATGattgcataaatacattttttctatcAATGTTCTTTAAACCATGCATGTTACACAAGTGATTTAAATAACTGTTGCACTCCTACTTATTTTAtactttcaataaaatgtaatcaactgaaatgcattttccacaacttgagcattttgtttttttaaatatccaggAATTTGTAAGATTCAAACCATGTAACTTGAGCTTGAAAGACTGGGTTTCAAATCCAACTTTTGATTGAAATTAGGTGAAATTGTAGATACCaggaaagtgtttgtttttgtaagtcaGCTTTTTGTCCAAGGGTGGAAGTTGGTTGGAAT

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000990 True 1498 mRNA 0.44 7 11737469 11740984

Neighbor

gene id symbol gene type direction distance location
AMCG00000983 NA coding upstream 62410 11668570 ~ 11675059 (+)
AMCG00000985 NA coding upstream 74823 11656653 ~ 11662646 (+)
AMCG00000984 NA coding upstream 114833 11620258 ~ 11622636 (+)
AMCG00000982 NA coding upstream 125815 11600268 ~ 11611654 (+)
AMCG00000981 cers6 coding upstream 139919 11558741 ~ 11597550 (+)
AMCG00000996 LOC106581781,LOC105022468 coding downstream 5175 11746159 ~ 11784742 (+)
AMCG00000997 NA coding downstream 45558 11786542 ~ 11795450 (+)
AMCG00000993 ppig,LOC106586208 coding downstream 61871 11802855 ~ 11811289 (+)
AMCG00001001 NA coding downstream 74619 11815603 ~ 11816325 (+)
AMCG00000995 NA coding downstream 85392 11826376 ~ 11839893 (+)
G127509 NA non-coding upstream 1292532 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2359880 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2654588 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3097646 8638596 ~ 8639823 (+)
G127096 NA non-coding upstream 3442596 8294518 ~ 8294873 (+)
G127924 NA non-coding downstream 353157 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 799097 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 865055 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 898001 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 1096667 12837651 ~ 12841008 (+)
AMCG00000949 NA other upstream 1583282 10100283 ~ 10154187 (+)
G127134 NA other upstream 3117274 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6271488 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 9923312 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 10038896 1668845 ~ 1698573 (+)
AMCG00001002 myo3b other downstream 258680 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 547966 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3409291 15150275 ~ 15184392 (+)
G128823 NA other downstream 3668128 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3719548 15460532 ~ 15463853 (+)

Expression


Co-expression Network