AMCG00000993 (ppig,LOC106586208)


Basic Information

Item Value
gene id AMCG00000993
gene name ppig,LOC106586208
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11802855 ~ 11811289 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000993
atttaaaaatagacgtGTACATCTATATCAATGCATATGTATAGCAACTCAATATGAATGAGCCACTAAAATCTCCTTCAACAATAGCATCGCAGTGCTGCGGGTGAACGCAGGGGCTCCGCTCCGCACAGCACGCAAGGCACGCACGGCTGCCGGCTGTGACCCCGCTCGGCCGCGCTGACTGGCGGATATTTACCCGAAATGCACTGACGTCTCTCTTAGCGCCATCTTTAGAAATTAGTGAAGGAGAAAAACTGGATCGGGCTCGTCTTCCTGCGCTTTTGGGAAGCAGCCGAGGGACACGCACAGCGGCAGAATAAGTCAGGGGCAGACTCTGGGAACAGTAATGGGTGTGAAGGTGCAGAGACCACGGTGCTTTTTTGACATCGCTATCAGCAATGTGCCAGTGGGGAGAGTCgtatttgaattgttttctgATGTGTGTCCTAAAACAGTGGAGAACTTCCGTTGCCTCTGTACAGgtgAAAAGGGGGTTGGATCAGGTACCCAAAAGCCTCTGCATTACAAAGGATGCTTATTTCATAGAATTGTAAAGGACTTTATGATTCAAGGAGGAGACTTTAGTGAAGGCAATGGCAGAGGAGGTGAATCTATTTATGGAGGATTTTTTGAAGATGAAAGTTTCTCAGTTAAACACAACAAGGAGTACCTTCTATCCATGGCAAACAGGGGCAAGGACACAAATGGCTCTCAGTTTTTTATAACAACAAAGCCTACACCTCATTTAGACGGGGTTCATGTGGTTTTTGGACAAGTGATCTCTGGTCAAGAAGTGATCAAGACCATTGAAAACCAGAAGACTGATGCCAGCAGCAGACCTTTTGCTGAAGTAAAGGTTACCAACTGTGGGGAGCTAATTCCAAAATCTAAAGcaaaaaaggaggagaagaagagacGCAAATCATCCTCAAGTGGCAGCGACAGCTCCAGTGAATCGGACTCCTCCTCCGAATCATCCTCCGAATCTGACGGGGAGTCTGAAAAAGAGTCcaagaaacagaagaagaagcacAAGAAAGAATCCAAGAAgcggaaaaaggaaaagaagctgaaaaagaaagagaagaagagCTCTGAAGAGGAAAGcgaagaagagaaaaatgagGCACAGCCCGTCTCCACTGTACGCCCAGAGGAAATCCCTCCCATCCCAGAAAACAGATTCCTGATGAGGAGGAGTCCTCAGCAGAAAGAGGAGAtggggaaggagaaggagaagaaaaaagagcgtgagagggagagCATTCCTGTAAACTCGCAGCCATCTGCATATCAGAGGAGGCTCCTGGTGACGAGGTCTGGCAGGAAAATAAAAGGGCGAGGACCAAGACGCTACAGAACTCCGTCCAGATCCAGGTCAAGGTCCAGGGACCGGTTCCGGCGCAGCGAGACGCCGCCCCACTGGAGGCAGGAGATGCAGCGAGCGCAGAGGATGAGGGCTCCCAGCGGAGAGCGCTGGATCAAAGGAGACAAGAGTGACTTAATGGAGGGTAAGAATGAGATCCCAAAACCTCCAGGAAGAGGAAGGGAAAGGAAGACCTCCGAGAGCAAAAACGAGACCATAGATAGTCCCAGCAAGAACCGTGAGAAGGAGAAGAGGGGCCGGTCACGCAGGTCCAAGAGCAAGGACAAAGAGCCCAAGAAAGAGGCGGACAAAGAGGACAAGCATGACAAACACAAGTCCAAGAAAAAAGCCAAATCTAGAAGCCGCAGCAAGAGCAAGGACAAGCGCGCCAAATCGAGGAgcaaagagagagagtacaAGCGTGGTAAGGGTGAGGACAGGAGAGGCCGATCCAGGAGCAAGGACCGCAATCACAccaaaggcagagagagaaccTCCGAGCAGGGCCCGAAAGAACGAGAGAAGAGCAAGAGCCGCGACCGGAGCAAGCGGACGAGGTCTGAAAGCAAGGAGAAGGATGAGAGTAAAAGCAAAGAGCGAGAGAAGCACGCCAAGTCACGCAGCAAAGAGAGGGACTCGAACAAGGACAGGCCCCGGCGTTCCGGCAGCCGAAGCCGAGACCACGGGAAGCGAGCCCAGTCGCGCAGCAGGGACCGGGACAGGAGCAGGAGCAAGGAGCGCCAGCGCAACAGAGACCGGGACGCCAAGAGACGAGGGAGGTCCAAGAGCAGAGAGCGCAAGAGGAGTCCTGACCGCAATAAACCCCGGGACTCTCGCAGAGGCAGGAAATCCAGGAGCGCCGACCGGGACCGGAGCAGGAGCGCCGAGAAAGAACGAAGCCAGACGAAGGACGGCTCGCAGCATAGGAAGAGCAGGACCAGCGAGGAGCCACGCCGGAATAAGAGGTCCAAGAGCCgagggagcagcagcagcagcgccggGAGCGAGCGGAAGGCCAGGAACAAGGACCGCAAGAGCAGGAGTCGGAGTCCCGGTTCcaagagaaagaaggaaagtagcagagagagagagctggcgCAGAAAAGCAAGGAAAGAGAGAAGAACCAGTCCCCCAGCGCAGACAAGAATCAAAAGTCCAAGAGCCAGGAAAAGGAGAAGAACCATAACAAGGATAAAAAATATGACTCCAGTACAGACGAGAGCGATTAAGCTACAGAACTGAGTCTTCTGGATCTATAGTTTTGTTAAATGATCTTTAATTTCGCTGCAGGCGACGCTGGGGACataccttttttaaattgagttcAGTTCAGACACTGCAGCCTGGAATATTTGTACTACTGAAGTTTTAATAAAATTTTAAAGCGACATGGAACCTGGTTTTGTTCTTCTGGTGTGACACTGTAGATTGggagttatttttgtatttctctacCTGGCTTGTCCGTATCTTGAGATGCACAGACTAATGACCTGTGAGCTCTCGGTAATGAGAGTGGTTACTGGAAAATGAACTCTCGGCGACCTGTTAAATAATCCCTGGTATCTACATGTAGATGCCTTGTAATAAGAACCGTGTATACCCTTAGATGGTGTATAAAATGTGAGTTTTAAGAATCTTTTGAAGTCGTCCAGAATTGTTCAACAAGACGCTCAGGACTCTGCAGTGCTAGACGTGTTTTTGGaggacttttgttttgtgttttgatttggcaCTGCAAGAAAAGAAATGAAGTAAAATGATTTTACTTTAGGCAGTGTATTCAACGCAGATGTGACCGGTTCAAACTGAAAATGGTTGATTTgtgtaaagattgaataaatgtaatcatGCAACATACAGTAGATCCCACCTGAATGTCTGCAAATGTATCTAAGATTCATTAACATGGACTGGAATGCTGTATTTGAAATGGGCAAGTACATTTGGCGAATCTTCCATCACACATgatttacagaaatatattgcTTTACGAATTGAGAACTAAACCGGTGATGGATATTAATTTCGAGATGCATTACATAGAATGTACGCTAGGTTATCGGCTATTTTAGTATGCCTGTATCTTGTTTTAACTGTTGGGAACGTTCAGTTTTGGACTCGGACCTGtttgggggggggaaatgtaaaaacaaatactgaatattGTGAATTGGAAGGGCTGCcatctatttttaatatcagtTCTCTGGAAGTTACATTTataagagggggaaaaaaaatgtacataactCGTATGCATCAGACATGGGTGTGTCAGCGttcttttgtttcatgtttttccaTTGGTTATTACTTTCCAATATTTATAATTGATCAGGGGGTATAAATCCAAGCTGCATGAATTGTCCCTGGTTTAATTATGTGACCTGTTCGTTCATTTGCCGTGTTTGAGTTCAAGGCGTCCGCTCCATGCTGTCTGAGTGAATACTGTGCCGTcacattttattctaaattCAGTGTATGGTTTAAATtgaaactgatcattttatatacatgttttttacttgtttttatttgatttcattacCAACATTATACAGTTGTCTGTG

Function

symbol description
ppig Predicted to enable cyclosporin A binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm and nucleus. Orthologous to human PPIG (peptidylprolyl isomerase G).

NR:

description
PREDICTED: peptidyl-prolyl cis-trans isomerase G

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG:

id description
K09566 PPIG; peptidyl-prolyl isomerase G (cyclophilin G)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000993 True 3940 mRNA 0.47 13 11802855 11811289

Neighbor

gene id symbol gene type direction distance location
AMCG00000997 NA coding upstream 7405 11786542 ~ 11795450 (+)
AMCG00000996 LOC106581781,LOC105022468 coding upstream 18113 11746159 ~ 11784742 (+)
AMCG00000990 NA coding upstream 61871 11737469 ~ 11740984 (+)
AMCG00000983 NA coding upstream 127796 11668570 ~ 11675059 (+)
AMCG00000985 NA coding upstream 140209 11656653 ~ 11662646 (+)
AMCG00001001 NA coding downstream 4314 11815603 ~ 11816325 (+)
AMCG00000995 NA coding downstream 15087 11826376 ~ 11839893 (+)
AMCG00000994 NA coding downstream 29201 11840490 ~ 11847160 (+)
AMCG00001004 ubr3 coding downstream 37088 11848377 ~ 11872129 (+)
AMCG00001006 NA coding downstream 71355 11882644 ~ 11909312 (+)
G127774 atp5b,LOC107682211,LOC103355037,LOC102782720,LOC100705231,LOC102302090 non-coding upstream 60105 11671768 ~ 11742750 (+)
G127509 NA non-coding upstream 1357918 10442993 ~ 10444937 (+)
G127278 NA non-coding upstream 2425266 9363107 ~ 9377589 (+)
G127206 NA non-coding upstream 2719974 9081327 ~ 9082881 (+)
G127144 NA non-coding upstream 3163032 8638596 ~ 8639823 (+)
G127924 NA non-coding downstream 282852 12094141 ~ 12096863 (+)
G128074 LOC103479331,LOC106632289,LOC101486364 non-coding downstream 728792 12540081 ~ 12540318 (+)
G128101 NA non-coding downstream 794750 12606039 ~ 12655172 (+)
G128107 ola1,LOC107660044 non-coding downstream 827696 12638985 ~ 12676174 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding downstream 1026362 12837651 ~ 12841008 (+)
AMCG00000949 NA other upstream 1648668 10100283 ~ 10154187 (+)
G127134 NA other upstream 3182660 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 6336874 5461301 ~ 5465981 (+)
AMCG00000734 NA other upstream 9988698 1805407 ~ 1814157 (+)
AMCG00000729 satb2,LOC107690605,LOC107569722 other upstream 10104282 1668845 ~ 1698573 (+)
AMCG00001002 myo3b other downstream 188375 11999664 ~ 12011425 (+)
AMCG00001022 NA other downstream 477661 12288950 ~ 12385042 (+)
AMCG00001098 NA other downstream 3338986 15150275 ~ 15184392 (+)
G128823 NA other downstream 3597823 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 3649243 15460532 ~ 15463853 (+)

Expression


Co-expression Network