AMCG00000998


Basic Information

Item Value
gene id AMCG00000998
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11811434 ~ 11815050 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000998
CGTTTCCTAGCGACACCCTGTAAACTGAGTTGCTAACAGCAGCACtgagtttgtgtctgtgttgtaaaaaatgtgatttaattgaacCCAACCACACACAAGCAATGCAGATGTCTACAGTGGTGCAGTACGGCAGAAGGGAGGGCAGTGGGAAGAAGGTTGCGTACGACCCCGAGTTCACAACGAGGCTGCCAGATCTCCGCCAGGTCACCGTTCTGCCTAAAGCGGAGTGGCTCCGGATTGAAGGCAGCCTGCATGGggtggacagagagagggagctggCGGAGGACCGGAAGCGGGAGAGGGAGGCTCTGCACCAGCGCTCCAAGGAAGAGGTTAAGGGCTGGTCCAACTCCATTGCGGGTCAAAGGCAGCAGAAGCTCGAGGCCAGGAAAGTGCGCGAAGAAAtcgaggaggaggagaagaagcagGTCGATTTAGCAGAAGCGCAGTACCAGGCCGAGAGGAGAAGAGAAGCCATCGAGCAGGCGAAGGCCCAGCAGTACTACCAGACCGACAGAGTGAAGCGATTCCACAGCGCCCTGCTGCTGGCCGAGGTGCTGAAGGAGCGGGACGCCCAGCTGGAGCTGAAGCAGAAGAAGAGGAGCGCCACGAAGGACGCGGAGGGGCACATCAGGATGCAGATGGAGATGGAAAAGGAGGCGGCGATTCACCAGGACCAGCAGAAGGCCCTGCAGAGGCTGCTGGACGGGAAGGCAGCGGCGGAGACTCTGAGGCAACAGATAAGGGAGCGCGAGCGGGCGGAGGAGCTGGAGAAACTGGCCAGCAGGAGAGAGCGGGAGGACATCCGGCAGAAGACTCAGCTGTTCGAGTGGGAGACGAGGGAGCGGGAGCagcagaggagagaagaaaagaggCAGATCATGAAAGCACATATGGAGCAATTGTCCAACAGAGACATTATTAAAGCaatggaaaagcaaaaacaagaggaggaggaggagcgcaTTCGTTGTTTTTCCTCAGCAAAGCGCAACATGGCCAAGTTGAGGAAAGAGAAGGAGGCCGAACTGTTTTGCGAGGTGCAGCGGCACAAGGACCGGATGGTTGAACTGCTGGCCACACACCTCCAGCAGAAGGAGAACAATGATGACCAGATTCTTGCCAGAGCTGTGGAAGAGCGGGAGGCAAAGCTggagagagaacagaaagaaaaagaggagaaaaggATGTCCGAACTGAAGTCCATTTCTGCTCACCGAGAAGACATGAGgcaacaaaaagaagaaaaggaaaaaacagagaaactgaAAGCTCTAGAAATGCTTCATGCCAAAAAAGCAGCTGATAAGATTTTCCTCGAAAAACAATGGGAAAAGGAACAGAAAGCTAAAGAGCAGAGTAAAAGGCTGCAAGAACTCCATGTTCAACAAATGGCTGAGAGACAGGAAAAGCTGCTCCTTACCCAGAAAGCACAGCTGCTCTATGACAAGCAAGACGAAGCTCACACTATCGCAGAAGAGCAGAGATTCCAGGAATACGCGAAGGAAGTAATTGAGTCAGCGATGAAAGGGCAGAGAAACACTGTCCCCCTGAAGAAGGCAGCCCGGGAGGGCCTGGGGGGGGGACTGGGCCCCGTCGTTGGAGGCGTAAGACCGAGTTATCAGGTTCAGGATAACACTCGAGTCGAGCTGCCCAATTATAACCGCAGCACCACGCAGGAGATCAAGGAAATCTATGAAACCGGTGACATCCAGCTCGCTAAGAAAAGACTAGGCTTTACCTGGTAAAAGTGtgagcaaatatttattgtcACTTGATTCACACAGGATCTTGTTAGTTTTACAGCAAACATTAGCCTTTGTAACATTAGTCTGTGTAATTGAAATGTAGTGTCTCTACCTTTTAAGAAATTAAGATTACATCCTGAGGAATGGAGAGTCgagataattaaatgtttatatacaaaatacgTCTGTAGTGTGTGTAAGAATACCTGTTTGAAACCATCACTGTTTATGCTAAAGGAATTGAAATATTGAATCTACATATTACAACACAAGCAGTGAAAATTAACTATGAAAATATACCATTGCCAATTGATCGAAGGGCGACAGATGTAAAACTAACTCATCATAGAATTGATCGGAATGAAAAATTAGCctattgttttttccccagtatatacaaataaatatcttCATTCTTTACACGCGAGGTCTCACTGTTGGGGTTCTTTATTAAACGTCATCGGGAACTATTAAATTGTAAGCTTTCATACTGACAACTACATCATGTTTCACTGAATAGGAGGGAACATTTAGTTAAAATAACAATTCCCCAGCTGGTCATGTTCCAAGAGGTTTGTTCCCAGATCAGTTGCTAAACTCGGCATTTGTCACTATTATACCAATTTGCACTAAACCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000998 True 2389 mRNA 0.48 9 11811434 11815050

Neighbor

gene id symbol gene type direction distance location
AMCG00000999 NA coding downstream 8981 11795399 ~ 11802453 (-)
AMCG00000991 atp5b,LOC102199207 coding downstream 65253 11741361 ~ 11746181 (-)
AMCG00000992 lrp2 coding downstream 77794 11675086 ~ 11733640 (-)
AMCG00000987 abcb11b,abcb11,LOC105911976,LOC107692229,LOC107602798,LOC108438644,LOC108270741 coding downstream 156428 11625091 ~ 11655006 (-)
AMCG00000988 NA coding downstream 196446 11611903 ~ 11614988 (-)
AMCG00001000 mettl5 coding upstream 29087 11844137 ~ 11847160 (-)
AMCG00001015 tlk1 coding upstream 279416 12094466 ~ 12110600 (-)
AMCG00001014 NA coding upstream 313515 12128565 ~ 12141472 (-)
AMCG00001021 slc25a12,LOC102297988 coding upstream 378149 12193199 ~ 12210908 (-)
AMCG00001020 dlx2,LOC106581766,LOC102799862 coding upstream 471117 12286167 ~ 12287617 (-)
G127747 NA non-coding downstream 193329 11615457 ~ 11618105 (-)
G127743 NA non-coding downstream 199822 11610243 ~ 11611612 (-)
G127742 NA non-coding downstream 201804 11609271 ~ 11609630 (-)
G127740 NA non-coding downstream 205258 11605804 ~ 11606176 (-)
G127718 NA non-coding downstream 403574 11396710 ~ 11407860 (-)
G127899 NA non-coding upstream 93936 11908986 ~ 11911822 (-)
G127976 NA non-coding upstream 339458 12154508 ~ 12158483 (-)
G128045 NA non-coding upstream 543509 12358559 ~ 12387584 (-)
G128070 NA non-coding upstream 678128 12493178 ~ 12495215 (-)
G128155 NA non-coding upstream 949862 12764912 ~ 12810017 (-)
AMCG00000960 NA other downstream 1111070 10696856 ~ 10700364 (-)
G127443 NA other downstream 1533223 10274687 ~ 10278211 (-)
G127292 NA other downstream 2392109 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 4165712 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 5077617 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 882127 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 910644 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 917134 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 1541933 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 1952491 13767541 ~ 13773878 (-)

Expression


Co-expression Network