AMCG00000999


Basic Information

Item Value
gene id AMCG00000999
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 11795399 ~ 11802453 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000999
TGGGAAGTGAAATGGGATTTTAAGTTATTAATGTGTGCTGGGATTGGGATGTGGTGTTTGTCATCATGGCCTTGGGTGTAATTCACAgctaaaataaactgaagtaaATGAAAAATGGCTGTATATGTGATTCATGGAAATGCTGGGCAGTAGATGTTAACGTGCGGGTCACATGTGTGTTTGGCAGGCATGGCCCggctgtgctcagtgtgaatgTCAAACCTGTAAGGCCCCGCACACAATGAGGGGAAATCATCCCAACATATCCCACTGAAAGACAGCGCCTGGACCATGTATCGGCTGAGGAGTGTGTGCCGGGCCTCCCGCAGGCTCTTTCACGCCCGGGCTGTAGCCGGCGATCAGGTGCTGGAGCAGCTGCATGTCTGCTCCAGCGAGGATCAAGTCTTAGATGTGGTGGGCAAGAACAAGGCCAAGCTCTCCGTGCGCCACGTGAcctgtgccatggacatgctgTGGCGGTTCCAGAAGGACAGGCCGCACATACTACGCAGGGTGGACTTCATCAAAAACCACCCCCAGTTCCTCACCCTGCGTGTGTTGGCAGAGAACAAGATCGAGCTGATGGATGACAGTGTGCTGGTAGACACGCTCTACAACGTACTCAGGCTCAATGTGGAATTGCATGACTCTCTGATCCAGGAGCTGGTGACAGAAGCTTCGATCAGGATGGACAGATTCCCAATGCAAACGCTGTCCAAGTTTGCCATCTGCCTAAATGACCAACATCTGCAGCACAGCCCACTCATGGGGAGCATTGCTGAGATTTTAAACCAGAAGCTGGACACCATACAAGATGCCAGAGTCCTGACCACCCTGATGATCAGCGTGTCGGCCCTCATCTCTCCGCGGCTCCGGGACTCCCTCATCGAGAAAGCGGACTCCCTGCTGGACACCTCGGACACCTCTCATTTCAACAACCCCAGGAGGGTGGTCCAGTTTCTGCGCAACATCAAGCACAGCTATAGGCCACTGCTGCTGAAGTGCAACCAGATTTTCATTCGCAATATCAAGGATCTGGACGCAGAGTACATCAGCATCATCCTTGGGCTTTATCAGTCCCTCCAGTTCAGTAACTGTGACTTTCGCCTGGCTGTGAAACGGAGGCTCACCGAGCTGTTTGATTCCTGCACTGAGCCCACGTCCTTCAGCAAACTCTTCGCTTCACTTGGGCCCATTGCTGGAGAGGATACTAGGGAAAGGCTGGAAAATACTGCATTGCTACTGGCGGATGAGTTCAACTCCCAGCAGGCCCTGGCAGTGGCAGAGACCATGGTGGAAATGGAAAGCAGAAACCTCCAACTGATTAACAAAATTGCATCGATCTTTTACAAGGACTTAGATTTATGTAAACCCATGGAGGTGACTAGAATGACTCAAGCCCTGATTACGCTGCGCTACCAGAATCCTGACATGTTCGTCAAACTGAGGAGTATACTGGTGAGTTACCTGCAGACCAGTGTGTATCCCTGTGAGGTGACCATGCTGACCCGGGTGCTGTCCATGCTGCCCTGTGCTCGTGTGGACGAGGCGGTGACCTCACGGGTGGACGCTGTGCTGCCGCAGTGCAGCCTCAGTGACCTAAACTCCCTGGCCATCGTCATCGCCAAGTGGGTGCGCAACGATCCCTCCCACAGGCACGCCACGCCAAGCGTCTATGTGAAGCTGCTGCAGAAGCTGAACATGGTGGGGCTGGAGAGGCTACGGCACGCAGACAACATGGATCAGCTGCTGGAGGAGCTCAAGTATGTCCCCGGAGAATGGTTTGAGGAGATGCTGCTGGAGGAGACCATGGGCAGCTTGCAGAGGCTGATGGACCAGATCTCGGTGAACAACGTCACTGAGCTCGCCCTTTTCCTAACCAGAACCAACCACCTCTGCACCGCTGTGATGGACAGACTCGCCGTAGTGGCCATGGAGCACATCGAGAAGATCCATTATTCCGGAACATATGCCACCATCCTGCCTTTCGCTATCCTGAACTACGATCTGCCACAAGGCGACGAGTTTTACAACGTCTGTGTTGAACACTTCAGACCACATTTAAATTCCTTTGACCCCCAtctgctggtgctgctggcaTATTCTCTGGCAGTGGCAGATTGCTTCCCAGAGGATTTAATTCGGAAGATTTTTAATGTGGATTTCCTGGCCAAGCTGGATGCCCAGTTACAAACTCTTCCCGACGCTCTGAACATGCGGATCAGACTGCGGCTGATGGAGCTCAACCGAGCCGTGTGTCTGGAGTGCCCCGAGTTCCAGGTCCCCTGGTTCCACGAGAGATACTGCCAACACCTGCAGAGGAAAGGCTGTGAATCCATCAGCGCAGTTCAACAGCAGATCCATAAAATGCTGGGGGAGATTCTTGGAGGAATGAACTATGCCAAAGTGTCTGTACTTACGCCTTATTTCTATGCAATAGACTTTGAATGTATCCTGGACAAACACAGGAAGCCCATCCCATACGTGGAGCCGAGGGTCCTggtgacagagggagggaaggtGCAATGGGGGCCTGGCACTGCCTCCCAGGAAGGGACTGAACTCCCCCCAGGGGCTCAGCGTGTCGCTGTGGATTTCCTGGATTCAAAATCCTTCTGTAAAAACTCCCATCATATGAAAGGAGAGGCCATGATGAGGAAGAGGCACCTGGAGATTCTGGGATACCATGTATGCCAGGTTCCTCACTTTGAGTGGAATTCAATGGAACTGTCGACAAATGACGCTTGGAAAGAATACCTGCGAAAGAAGATATTTGCGGATCAATCTTAATGTTGATCGTCAGATGTCTCAAAAGGAGGGACAATTTTTTTAGGAcgattgtattgtattggagaaataaatataatttctcttGCAACTGGCATTAATGTTGTTTAGTGGACCGGCACTCAAATTAGCAGTAGCTTAGACGAGACAGGATGGGATGAGCTGGTCTGTGCTTACAGCCTTACGGTCTCTGAAGAGAAGACTGCCATAGTCACTGTAAACTTAGTGATATTAAAATACCTCCAGTTTAAATTTGTTTCCCCCTCCATCTTGTATTAGTGCTCCAAGATTTTTCCACTTCAAGCTTCAGGTTTTGCATTGGATGTAGCTTCTTGACTCTCCATGAAGAGCTATAAATATTGCCTCTTTCGAATGACCATGTATCAGTTTCTATATTACATTATTGATGTCACTCACCCCTTTACTGAACCACACTGGTATTTGCCTCTTGCAGCTGTCTCACACTATGCAACACTTGGAAACCTAAGAGACTGTGAAGAACAATGTTTTCTATACATCTAGAAGTGAAATTAACAGTTTGTGTTTACAatttatagaaatatatgttttagtttaaaatgtttattttacaaaaaaaaaaaatcaaaggaaCATCAG

Function

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0004672 protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000999 True 3405 mRNA 0.50 15 11795399 11802453

Neighbor

gene id symbol gene type direction distance location
AMCG00000991 atp5b,LOC102199207 coding downstream 49218 11741361 ~ 11746181 (-)
AMCG00000992 lrp2 coding downstream 61759 11675086 ~ 11733640 (-)
AMCG00000987 abcb11b,abcb11,LOC105911976,LOC107692229,LOC107602798,LOC108438644,LOC108270741 coding downstream 140393 11625091 ~ 11655006 (-)
AMCG00000988 NA coding downstream 180411 11611903 ~ 11614988 (-)
AMCG00000979 stk39,LOC106586202 coding downstream 239278 11538485 ~ 11556121 (-)
AMCG00000998 NA coding upstream 8981 11811434 ~ 11815050 (-)
AMCG00001000 mettl5 coding upstream 41684 11844137 ~ 11847160 (-)
AMCG00001015 tlk1 coding upstream 292013 12094466 ~ 12110600 (-)
AMCG00001014 NA coding upstream 326112 12128565 ~ 12141472 (-)
AMCG00001021 slc25a12,LOC102297988 coding upstream 390746 12193199 ~ 12210908 (-)
G127747 NA non-coding downstream 177294 11615457 ~ 11618105 (-)
G127743 NA non-coding downstream 183787 11610243 ~ 11611612 (-)
G127742 NA non-coding downstream 185769 11609271 ~ 11609630 (-)
G127740 NA non-coding downstream 189223 11605804 ~ 11606176 (-)
G127718 NA non-coding downstream 387539 11396710 ~ 11407860 (-)
G127899 NA non-coding upstream 106533 11908986 ~ 11911822 (-)
G127976 NA non-coding upstream 352055 12154508 ~ 12158483 (-)
G128045 NA non-coding upstream 556106 12358559 ~ 12387584 (-)
G128070 NA non-coding upstream 690725 12493178 ~ 12495215 (-)
G128155 NA non-coding upstream 962459 12764912 ~ 12810017 (-)
AMCG00000960 NA other downstream 1095035 10696856 ~ 10700364 (-)
G127443 NA other downstream 1517188 10274687 ~ 10278211 (-)
G127292 NA other downstream 2376074 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 4149677 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 5061582 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 894724 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 923241 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 929731 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 1554530 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 1965088 13767541 ~ 13773878 (-)

Expression


Co-expression Network