AMCG00001014


Basic Information

Item Value
gene id AMCG00001014
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12128565 ~ 12141472 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001014
CCTTGTACGAAAGTTCAGCATTGCATTTCACTTGTTATTAACACACAACTTTTCCctagaaagaaatacaattatgtagcatattttctgtattcttGCAGAACGAAACATCCCAGTGAGGATGAGACGCCAATGGGCACTGTCCCTGGCATCCCTGGCAAAGAGGAGCCTACAGTGCAGACTGAGCAGCAGCAGACCTCCTGCCCCACTTGGTGGTAGAATATTAACCAGCCCCAATGAAGTGTTCCAGCATAATATGTGggaTCACGTTCAGTGGTCAGAGGAAGATGAAGAAAATGCACGACAGAAAGCTGAAGAAAATTCCAGTGTGCGCATTCCTCTGGACGAGCAAgTGAAATACGATAGAGACGCTTGTAAATACTGGGATGGATTTTACGAAACCCATCAGAACAAGTTCTTCAAAGATCGTAACTGGCTGTTCAGAGAGTTTCCTGAGATTCTGTCTGGACGGTCTAGTAACGGGGCTGGGAAGGAAGGATGCTGTCACTCAGCAGCAGCTTCCTCTGCACGATCATATGTCTCTGACAGCACAGCCCCGCTGACAGGGCATAGCGAGTGGCTGTCTACACCaggctgcagacacacagagcgcAGCAAGGAAGGGGGAGTGGAGAGCCACAGCTTGTGTGGAGAGCCtgggagagagcaggagagtgGAGGGTGGACTGATACATTCCCAGGAAGTCAGGCAGCGTTCAGGATCCTTGAGGTAGGATGTGGGGCTGGAAACAGTGTTTTTCCCATTGTAAATTCCATTAAAGACACAGGAACATTCCTGTACTGCTGTGATTTCTCACCGCGAGCTGTCGAGCTGGTAAAGGCCCACCCAAGCTACAGCTCAGTTCTGTGTCATGTCTTTGTGCATGATGTCTGCGATGAAGCCGCCACCTTCCCATTTCCGCACATGAGCATAGACATCATTCTCGTTGTCTTCGTGCTATCGTCCATTCACCCTGAGCAAATGCAAGGAGTTGTAAACAGATTGACCCGGTTATTGAAGCCAGGGGGAATACTGCTATTCAGGGATTATGGCAGATACGACATGTCACAACTACGATTCAAAAGAGGACGCTGCTTGTTTGAAAACTTCTATGCCCGGGGAGATGGTACTTGCGTGTACTTTTTTACaaaagccGAAGTTCACAGTTTATTTGAGAGCGCTGGTTTAAAAGAAATCCAAAACTTGGAGGACAGGCGGCTGCAAGTGAACAGGAGGAAAGGAGTGGTGATGCACCGAGTCTGGATGCAAAGCAAGTATCAGAAACCACTGGAGATGGACATTTGTAAAGATGACTTTCCATAGCTGCATAAAACAGTGTTGACTTAAGCAGGGATTGAGTTCTGGGGGTCTCTTGCATCATTACTCAGACTCTTATGGATGTGATAAAGACTTATCTAAACAAGCAGAATCAGATGTGGCAGAATCCATCGACAGGGCAACACATCCAAGTACAATAAAATGTGCCTGTCAGAAGAATATCCACCGCAGGAATAAATGGTGGCCTGTTGCCACTTCAGCCTGCTGTCTCCCATGCCCTATATCTGCatcaaacattttgaaaatagcTTTAAGTCAAGGCTAATATTCAATATGGgtgaaatgtgtatgtgtgtgagatggctcaatgcaaataaaagagtaggaaaaggaaaatggagCTCACGGTGTAactagttgtttttttcagattgcTGAAATCCATCACCTCC

Function

GO:

id name namespace
GO:0016740 transferase activity molecular_function

KEGG:

id description
K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001014 True 1731 mRNA 0.46 10 12128565 12141472

Neighbor

gene id symbol gene type direction distance location
AMCG00001015 tlk1 coding downstream 17965 12094466 ~ 12110600 (-)
AMCG00001000 mettl5 coding downstream 281405 11844137 ~ 11847160 (-)
AMCG00000998 NA coding downstream 313515 11811434 ~ 11815050 (-)
AMCG00000999 NA coding downstream 326112 11795399 ~ 11802453 (-)
AMCG00000991 atp5b,LOC102199207 coding downstream 382384 11741361 ~ 11746181 (-)
AMCG00001021 slc25a12,LOC102297988 coding upstream 51727 12193199 ~ 12210908 (-)
AMCG00001020 dlx2,LOC106581766,LOC102799862 coding upstream 144695 12286167 ~ 12287617 (-)
AMCG00001024 NA coding upstream 259038 12400510 ~ 12415391 (-)
AMCG00001035 LOC106600091,LOC108430841 coding upstream 394346 12535818 ~ 12544417 (-)
AMCG00001033 LOC106632289,LOC101486364,LOC107740597 coding upstream 402971 12544443 ~ 12601997 (-)
G127899 NA non-coding downstream 216743 11908986 ~ 11911822 (-)
G127747 NA non-coding downstream 510460 11615457 ~ 11618105 (-)
G127743 NA non-coding downstream 516953 11610243 ~ 11611612 (-)
G127742 NA non-coding downstream 518935 11609271 ~ 11609630 (-)
G127740 NA non-coding downstream 522389 11605804 ~ 11606176 (-)
G127976 NA non-coding upstream 13036 12154508 ~ 12158483 (-)
G128045 NA non-coding upstream 217087 12358559 ~ 12387584 (-)
G128070 NA non-coding upstream 351706 12493178 ~ 12495215 (-)
G128155 NA non-coding upstream 623440 12764912 ~ 12810017 (-)
G128191 NA non-coding upstream 858110 12999582 ~ 12999876 (-)
AMCG00000960 NA other downstream 1428201 10696856 ~ 10700364 (-)
G127443 NA other downstream 1850354 10274687 ~ 10278211 (-)
G127292 NA other downstream 2709240 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 4482843 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 5394748 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 555705 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 584222 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 590712 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 1215511 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 1626069 13767541 ~ 13773878 (-)

Expression


Co-expression Network