AMCG00001032 (ola1,LOC107660044)


Basic Information

Item Value
gene id AMCG00001032
gene name ola1,LOC107660044
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 12652611 ~ 12658389 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001032
GTGCTTTTGAAGACGAAGATATCATCCACGTGGAGGGCTGTGTGGATCCGGTGCGGGACATGGAAATCATTCACGAGGAGCTGCGGCTAAAGGACGTGGAGCTCATCGGACCAATCATTGAAAAACTGGAGAAAGTGGCTGTTAGAGGAGGAGACAAAAAGCTGAAACCTGAATATGACATAATGTGCAAAATCAAGAACTGGGTAGTGGATGAAAAGAAACATGTCCGTTACAATCACGAATGGAACGACAAGGAGATTGAAGTGCTGaacaaatatttgcttttgACTTCCAAGCCAATGATTTATCTCGTCAACCTATCTGAAAAGGACTACattagaaaaaagaacaaa

Function

symbol description
ola1 Predicted to enable ATP hydrolysis activity. Predicted to be located in nucleolus. Predicted to be active in cytoplasm. Orthologous to human OLA1 (Obg like ATPase 1).

NR:

description
PREDICTED: obg-like ATPase 1 isoform X1

GO:

id name namespace
GO:0005730 nucleolus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0005525 GTP binding molecular_function
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001032 True 353 mRNA 0.42 3 12652611 12658389

Neighbor

gene id symbol gene type direction distance location
AMCG00001034 ola1,LOC107677584 coding downstream 10629 12636744 ~ 12641982 (-)
AMCG00001031 NA coding downstream 34656 12606362 ~ 12617955 (-)
AMCG00001033 LOC106632289,LOC101486364,LOC107740597 coding downstream 50614 12544443 ~ 12601997 (-)
AMCG00001035 LOC106600091,LOC108430841 coding downstream 108194 12535818 ~ 12544417 (-)
AMCG00001024 NA coding downstream 237220 12400510 ~ 12415391 (-)
AMCG00001030 ola1,LOC105019904 coding upstream 17633 12676022 ~ 12679428 (-)
AMCG00001040 NA coding upstream 47076 12705465 ~ 12721679 (-)
AMCG00001042 NA coding upstream 74230 12732619 ~ 12739464 (-)
AMCG00001038 chrna1,LOC106595477 coding upstream 94024 12752413 ~ 12760367 (-)
AMCG00001044 chn1,LOC107588230,LOC107600702,LOC100196534,LOC106586243,LOC106581750 coding upstream 107270 12765659 ~ 12777013 (-)
G128070 NA non-coding downstream 157396 12493178 ~ 12495215 (-)
G128045 NA non-coding downstream 265027 12358559 ~ 12387584 (-)
G127976 NA non-coding downstream 494128 12154508 ~ 12158483 (-)
G127899 NA non-coding downstream 740789 11908986 ~ 11911822 (-)
G127747 NA non-coding downstream 1034506 11615457 ~ 11618105 (-)
G128155 NA non-coding upstream 106523 12764912 ~ 12810017 (-)
G128191 NA non-coding upstream 341193 12999582 ~ 12999876 (-)
G128212 NA non-coding upstream 406751 13065140 ~ 13070429 (-)
G128237 hnrnpa3 non-coding upstream 548485 13206874 ~ 13211855 (-)
G128242 NA non-coding upstream 589500 13247889 ~ 13280730 (-)
AMCG00000960 NA other downstream 1952247 10696856 ~ 10700364 (-)
G127443 NA other downstream 2374400 10274687 ~ 10278211 (-)
G127292 NA other downstream 3233286 9418996 ~ 9419325 (-)
G127039 LOC100136012,LOC107575789 other downstream 5006889 7629915 ~ 7645722 (-)
AMCG00000888 LOC102209482 other downstream 5918794 6689568 ~ 6733817 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other upstream 38788 12697177 ~ 12703910 (-)
AMCG00001039 NA other upstream 67305 12725694 ~ 12732601 (-)
G128160 wipf1 other upstream 73795 12732184 ~ 12751516 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 698594 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 1109152 13767541 ~ 13773878 (-)

Expression


Co-expression Network