AMCG00001059


Basic Information

Item Value
gene id AMCG00001059
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13213789 ~ 13224364 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001059
GAGCTGCTGACGCAATGGCGTGAACTTGAAGTGCAATCAGGAAAGACGGGTTCAGGCTGTGCGGTCGTCTGAGTTCATGTTTCATCCGCACACACTTACCTGGACGCATGAACTCTGCCTTAGTCGCTGCCCAGGGACGGGTGTCCTTCTTGTTCACCTTTAACTCATTTCATTGATGTGACCTGGTGTGTGCAGGAGGGATGGCTCATTGATCAGTTCTGTATGGCGTGCATAGGTGTAGATTAATAGTCCAGgattgcattacatttatgGGGGAAGTGGAGAtgtttaaataacatatttatggCTGCCAATGTGATGTCATGAAGACTTAGGCTGGGCATAGAGAACATGCATGTATACTTCATATTGATTTGAAActgactttaaaaatatatatagctgcTGACCTATCTTCTTTTTGGAGAATGAGAAAAGCGTTCACACTGGATATGGATTTGATCGACATCCTGTGGAGGCAGGACATAGACCTCGGTGCTGGCCGCGAGGTTTTCGATTACAGCTACAGACAGAAGGAGTTCGAGCTCCAGAAGCAGAGGAAGCTCGAGGAGGAGAAGCGGGAGCAGCTccagaaggagagggagaaagcgCTGCTCGCTCAGCTGCAGCTAGATGAAGAgactggagagtttgttccccGGCTGCCGCAGAGCGCTGAACCAGAAACGAGTGCTGCACCCACGGAGGCCCCTCAGGATGTCATCACCTCAGAAGAGGATGGAGAGGCCCTTTCCTTTGACGAATGCATGCAGTTGCTTCTTGGAGAGTCGTTCCCATTGGTAGACGACCTCGAGACTTCATCTCCCTCTCTGGAGCCATCCGTCTCCCTTGCCGCAGTAAACAGCCCAGTCTTAATGGCTCCCCACCAGCCTCCGCAAGTTCAGCATTCCCTGCTCCCCACTTCACTGCCGGATCAGAAAACCGCACAAGACTTAGAACAAGCCTGGCAGGAGTTGCTTTCCATCCCAGAGCTGCAGCAGTGCCTAAACATGCAAATGGAAGACATGACAGATTTGACTAGTTACACAACCACAGAAAAGCCTCCGGAGATGCAGACTGCCGACTTCAACTACTACATGCCTAACCCCACTGAGGTTGTGGCAAACACACCAGATCCAGTCTGTCCTTCAGCATTTCTCAGCCCCTTTGAAGGCAGCTACCCCAGTATTGTTCCTCCAGAGAATCTCAATCAGATGACTTTGAATGTTTCAGATCTCAATGCAACCTTCGGTGCTAATACCTTTTGTGATATGTTTTACCCTGACCTCATTAATACAAAAGTAAACAGTGACCTTACAccagaaagcaatgcaaacagccCATCAGTTGAACTACAGAGTGAGCCACCAATAAAACCAGTGGAAATCCAAGAATTTACTATGGGGGACAGTTTTGAGAGTGACAAGTCTCAGAATATGGCTGAATTTCATGATTCTGACTCCGGGCTTTCAATGGATGCAAGTCCCAGCACAGCCTCACCGGAGAAGTCTGCCTATGGTGACGCATCCTTTGGATTTAGTGACTCGGACCTTGATGAGATAGACAGCAATCCTGGGAGTGCCACACCCGAATACAAAGAGATGTTCCCGATGTTGTACCACATGGATGGGTACCAAGCATCACCTTCTTCCACTTCACAGTCCGGCGACTCGTTTGGCCTGAAGATAAACATGCAGAACAATGAGCTGCCAGCAAGCCCTGGTCACAACAAGGCACCCTTTACCAAAGATAAGCACAAAAGCCGCGCGGAGTCTCGTCTCTCACGAGATGAGCAGCGGGCAAAGGCACTTCAGATACCTTTCTCGGTCGACAAGATTATTAACCTTCCTGTGGACGACTTCAATGAAATGATGTCCAAGCACCAGCTCGGCGAAGCACAGCTGGCTCTGATCCGGGACATCCGCAGACGGGGCAAGAACAAGGTGGCGGCCCAGAACTGCCGGAAGCGCAAGATGGAGAACATTGTGGGCTTGGAGTATGACCTGGACTCGctgaaggaggagaaagagaggctGCTGAAAGAGAAGGGCGAGAATGACAAGAACCTTCGGGAGATGAAGCAGCAGCTTAACAGCCTTTACCTGGAAGTGTTCAGCATGTTGCGCGATGAGGATGGCAAGCCCTACTCGCCCAGCGAATACTCCCTGCAGCAGACGTCCGATGGCAATGTGTTCCTTGTTCCCAGAAGCAAAAAGACAGTTCTGAAGAACAAAGCGAATTAGTGCTTCTCCGCTTacacagacttttttttctactgCATCACCATAATATATCTGTACCAATTTTGCTCTTAAGAATACTATGCAAGAGAAACAATATCCTTTTTTAGCCGTTATATTGCTTTAAGACAACCATAACATCAGAATTAACATACTCCTTGCATACTGTATATTAGTATGTTGATGTCTTAATTTTATCTACTCCAGATTATTCTTTTGTACtgttaagttttattttctaatattgCTTCCcgatatgttttgtaaatacatttctatcttATTTGCTGttgaattatataaaaagatttatatcacattttaGTATGCTAATTATTATGTTGTGTCTTTGTTGCAAATCATTGTGTAACTTTTAAATTTTATCTTTTATAAACGATTGATTAACTGTATAATTGGAAGTTTTTTCTTATGACTTCTTTCTTGTgc

Function

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG:

id description
K05638 NFE2L2, NRF2; nuclear factor erythroid 2-related factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001059 True 2687 mRNA 0.46 5 13213789 13224364

Neighbor

gene id symbol gene type direction distance location
AMCG00001051 evx2,evx2a,LOC107657379,LOC107671304 coding downstream 223907 12987035 ~ 12989882 (-)
AMCG00001048 lnpb coding downstream 239603 12959942 ~ 12974186 (-)
AMCG00001045 atp5g3,LOC106590033,LOC105007245 coding downstream 372664 12837442 ~ 12841125 (-)
AMCG00001046 atf2,LOC107671311,LOC107739459 coding downstream 377304 12814441 ~ 12836485 (-)
AMCG00001043 chn1,LOC107657347,LOC107742958,LOC107739458 coding downstream 418741 12789335 ~ 12795048 (-)
AMCG00001060 pde11a coding upstream 64649 13289013 ~ 13302989 (-)
AMCG00001066 NA coding upstream 210172 13434536 ~ 13441759 (-)
AMCG00001065 NA coding upstream 217687 13442051 ~ 13470870 (-)
AMCG00001064 NA coding upstream 249014 13473378 ~ 13486109 (-)
AMCG00001069 NA coding upstream 294197 13518561 ~ 13693118 (-)
G128237 hnrnpa3 non-coding downstream 1934 13206874 ~ 13211855 (-)
G128212 NA non-coding downstream 143360 13065140 ~ 13070429 (-)
G128191 NA non-coding downstream 213913 12999582 ~ 12999876 (-)
G128155 NA non-coding downstream 403772 12764912 ~ 12810017 (-)
G128070 NA non-coding downstream 718574 12493178 ~ 12495215 (-)
G128242 NA non-coding upstream 23525 13247889 ~ 13280730 (-)
G128322 NA non-coding upstream 372421 13596785 ~ 13597366 (-)
G128355 NA non-coding upstream 554868 13779232 ~ 13779656 (-)
G128358 NA non-coding upstream 559669 13784033 ~ 13785913 (-)
G128395 neurod1,ndf1 non-coding upstream 781905 14006269 ~ 14008671 (-)
G128160 wipf1 other downstream 462273 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 481188 12725694 ~ 12732601 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 509879 12697177 ~ 12703910 (-)
AMCG00000960 NA other downstream 2513425 10696856 ~ 10700364 (-)
G127443 NA other downstream 2935578 10274687 ~ 10278211 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other upstream 132619 13356983 ~ 13359770 (-)
AMCG00001068 LOC107576050 other upstream 543177 13767541 ~ 13773878 (-)
G128628 NA other upstream 1368335 14592699 ~ 14598570 (-)
G128741 NA other upstream 1954877 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 2139703 15364067 ~ 15433469 (-)

Expression


Co-expression Network