AMCG00001069


Basic Information

Item Value
gene id AMCG00001069
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 13518561 ~ 13693118 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001069
ATGAAAGCCTCTGGAGGCGGAGCCTGGGAAGGCGGAGCTGTAAATGCCTCTGGAGGCGGAGCTGTAAATGCCTCTGGGGGCGGAGCTGTAAATGCCTCTGGAGGCGGAGCCTGGGAAGGCGGAACCGAAGGGACCTCGGGAGGCAGAGTTGCAGGAGCCGTGGAAGCCAAGGAGGTCTTGATGGGCGGAGCCACGGGAGCCTCGGGAGCCTCAACCACGGGAGGCGGAGCCTCAACCACGGGAGGCGGAGCCTCGGAGGCTGCAGCGGGCGCGGAAGGAAGAGCAGCAGTGACCGGGGAAGGCTCCATCATTCGTGAGGCTGGTGCAGACCGTGAGAGGTCTAAGTACTGCCTGAATGGCCTGGACCGGAACTGGGGCATCGGACTGGACGGCGACGGCGGCGGCAACCGGGCACTCAGGCTGGGTGGTGGCAGCAGTCGGGATCGGgtcctctggttcggcggcggcggccgggacCGGGACCGGGGCCTGGAACTCTGGCTGGGCGACTGGGAGAGGCTGCTGCATGGGAAGGCGCTCAAGCACCAGAGTTCTCTGCAGGCGCTCAAAGCCAGGCGCCACCTTAAGATGGCTTACTACAGCTTTCCCTCTTACTATGCAAACCTGAATAACgattatgctgaaaaggaaaaaaccaTGGCCAAAGCCTTAGAAGACCTGAAAGCCAACTTCTATTGTGAGCTGTGCGACAAGCAGTACTACAAACACCAAGAGTTCGACAATCACATCAACTCATACGACCACGCGCACAAGCAGaGGCTTAAAGAGCTGAAACAAAGAGAGTTTGCCAGAAATGTTGCCTCGAAATCAAGAAAAGATGAAAAGAAGCAGGAAAAAGCTCTCAAGCGTTTACATGAACTAGCAGAGCAACGGAAGGAGTCAACCACTGTTGCCGTGGAAGACAGCTTCAAGGAGCTTTCCAGCAGACCCCACTCCCAGGCTGATGGTAAAACAgagcaaatcaaaactgtgcCATGTGGCACGGGAGCTGTTAAGGACGTGCCCTCTGTTGGCCTGCCTAGCCAGAGTAGACAAATTGAAGGGCCTTATAGCAACAACGTGAAAAAGCAAGTGTATGGTCAAAAAattggattttcattttcatttccaaagAAAGCATCTGTCAAGCTTGAATCATCAGCCGCAGTCTTCTGTGAGAATGCGGAGGACGGATCGATAGAGCTGAGCTTTAGACAGAAAAACAGGATAGCACCGGGTGACTGTTATCTTCCCAGTACTGCTCCACCAGAAAAAGCACTAAATTACGGTGAGACAAATTACAGCATTGGCACACAGCAAGAAGACTTTACCAACAAAAGCACCACTGCACAGTTCCAAGGGTCAGATGATGCGTCTGTGAAACAGTGCATTACAGAACCCGATTCAGATTTATGTGCCTTGCTGGTGTACTCTGAGGACGTGGAAAGCCACTCTTTATCAGAATTGCACACATTTCCTAAAGATACGAACAATGAAGAGGGTTTAACAGGTATGGAAAACTCGGCAGAATCTCTACAAAATGCCGCAGTAGAAACACAATCGAAATCTTCAGAAGAAGTCAAAGAAGATTCACAAATGGATGTTAGTATTTCGGAAGAAAACCTGACTCCGATTACAGACATTTCACCAATGGATAACACTGATACTCCGGTTATTGAATTAGACACTTCTGAATCAACTGAAAAAGTGGCAAACATGGCAGATAAAAACCCATCATGGGTATTTACGAAACCAAGTAAACCTTTTTCCTCTGTCATTAGTAAAGATGGGATGACTGTACTTCAGTGGCcctctgaaatgttattttttaccAAAACAGAGCCATCTTTATCCTACTGCTGTAATCCTCTTCATTTTGACTTTAAATCATCAAGGAATAAAGCTGAATCAGAGAGCAGCAAGTATAAAGCAAATGAATCACATGTTGTTCGTGCTGCAGTAAAAGAACCTCAGACAGACAATTCTTGTGTCAGCACACAGCTTTTGCATTGTGATAAGCACAACATAAAGTCTTCAAATGGCTGTGGCAACAGTTCTATACAAAAAGGTATCAATTCTGTAAAAGGAAATATTAACCATCAGGAGGCATTACTGAGAAATAACGAGCAGTCATCCGATCGGTTCGTAACTGCAGCTGGCAGTCATGCCAAAGCAAAAATGCACAAGAAAGCTAGGAAGCATTTGAAAGAGTGGACTGATGTgggaaaaaaagatacaaataaatcttGGAAAAAAGACAGGCACGACTTCAGGAGTCgcaaaaggaggaggaggagaaaagcaatgcagcattttaatgaaatgcaaaaggAGGACAACAGAAACGAGATAGAGACGGAGAAATCTGAAGAATTCCTGAAGCAGACAGAATGTATGTCGGGATTTGATGACCAATTTGGGATTGACACTGCAGAACAAGTTGAACCATTAGAGGAGTCAAAGCAATCACATCAAAATCAAGAGCAAAATGACAGTGGCGGTAACAAAGAAAGGGATAAGGTGggaatgaagaaaaaagcagCAGATTCCCATGGGCTAAAGAGACCTGTAAATGGATGCAACCATGAGAAAAATGCAAGTGTTGAATGTAGAAGAAGGAAACGACGGAGAAAAGCCTACAATGGGAAGCAGAGTTTAGTCATTAATTGGAAAATTGCTGATGGAGAGAGATCTTTACAGGATGTTGGTGTGGAGCATTTTTCCATGGATTCAGGCGTGGAAACCCTTCAGATTGAAAATGGACTGACAGCTGTGTTTCCAAACTCTAATGAAAATTCGAAGAGTTCCAGCAACATCGTAATCGATAGCTTGGAAAGTGAGAAAGGTTTAGTTCAGTTTCCTCCAAAGGGATATCTGGCCAACACGCAGGTGGAGTATATTGGCTGGACTGGTGACTCCATTCCTGCCAAGACTGAGGGTGAATGCAACAGTGAGATTGTTTCATCTGAGACTACGCTTGTGAGAGAAACCAATCAAAAGGAGAGATGTGGTTTTATAAATGAGGGTAAAAATGCAAACTCTGCTCAACATGTAAAATCAAACATGGACAAGGCACATGAAAAGCCCTCTCCAAAAAACCTTTTTGAAGCCCATTTCTGCCACTACGAAGTCCAGCAATTTAGAGGACAGAGTTCAGAAAGCTTTGGCCACCGCAATTCATTTCAGAACAGCCTCCACAGACAGCATCAGAAGAGTAATCACAACTTCACATGCCATGATGCTAGCATAAGCTGTGGCAACGTCAGGTCTGAGCACATCGCCGGACCATTCCCTGCATCTCCCCAAGGTTTCTTATTCTCCCCTGAAGACTCTGACAAACACACGACTCTGCACATCCAAGCCCACAGGCGGATGTTGCATCAGCAGACGTTTCCAAGCAAGCTGAAACCGATCCTGCAGACGCCCCCTCTCCCCATGTCGTCCCCGGTTCTCCATCCTGTACACCTCCCCCAGCCCATGTCCTCTACCTCTATTACAATTCAGCACACCATCCTCCAGCATCACGCTGCAGCCGTGGCCGCCTCTTGCTCCTTCCTCCAGCCCCAGCCGCCGCTCTTTCCTCTGCCTCGACCGCCCTTGCCTCATCTGCTAGGGGTGGAAATGTGCCCAGGAAGCCACCCTGCCTTCATTCCAGCTGCCCAGATGTCCATGTCTATCAAGTACTCCAAGCTGGAGGAGTCGGAAAAAGCGTTGGTTCCGCCCACCACGAACAGGAGGTCGTCCACCACCTCAATGCCGAAGTTGCTGTGTGGGCTGCATATGGTGGGCACTGGGCGCCAGCTGTTGGCGATCACGCCCACTCCTCTGCGCTTGCTCAACATGGGGACGATGGTGGTCCACTGGTTGGTCTCTGGGCTGTATGTTTCTGATGTCAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001069 True 3900 mRNA 0.48 10 13518561 13693118

Neighbor

gene id symbol gene type direction distance location
AMCG00001064 NA coding downstream 32452 13473378 ~ 13486109 (-)
AMCG00001065 NA coding downstream 47691 13442051 ~ 13470870 (-)
AMCG00001066 NA coding downstream 76802 13434536 ~ 13441759 (-)
AMCG00001060 pde11a coding downstream 215572 13289013 ~ 13302989 (-)
AMCG00001059 NA coding downstream 294197 13213789 ~ 13224364 (-)
AMCG00001071 frzb,LOC106582261,LOC106586471 coding upstream 104486 13797604 ~ 13802479 (-)
AMCG00001072 nckap1,LOC107739442,LOC107699024 coding upstream 113095 13806213 ~ 13820006 (-)
AMCG00001073 nckap1,LOC107676070 coding upstream 126901 13820019 ~ 13844401 (-)
AMCG00001077 NA coding upstream 246593 13939711 ~ 13960043 (-)
AMCG00001076 NA coding upstream 270085 13963203 ~ 13981932 (-)
G128242 NA non-coding downstream 237831 13247889 ~ 13280730 (-)
G128237 hnrnpa3 non-coding downstream 306706 13206874 ~ 13211855 (-)
G128212 NA non-coding downstream 448132 13065140 ~ 13070429 (-)
G128191 NA non-coding downstream 518685 12999582 ~ 12999876 (-)
G128155 NA non-coding downstream 708544 12764912 ~ 12810017 (-)
G128355 NA non-coding upstream 86114 13779232 ~ 13779656 (-)
G128358 NA non-coding upstream 90915 13784033 ~ 13785913 (-)
G128395 neurod1,ndf1 non-coding upstream 313151 14006269 ~ 14008671 (-)
G128614 NA non-coding upstream 891171 14584289 ~ 14585054 (-)
G128624 NA non-coding upstream 895907 14589025 ~ 14602330 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other downstream 158791 13356983 ~ 13359770 (-)
G128160 wipf1 other downstream 767045 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 785960 12725694 ~ 12732601 (-)
AMCG00001041 cir1,si:ch73-167c12.2 other downstream 814651 12697177 ~ 12703910 (-)
AMCG00000960 NA other downstream 2818197 10696856 ~ 10700364 (-)
AMCG00001068 LOC107576050 other upstream 74423 13767541 ~ 13773878 (-)
G128628 NA other upstream 899581 14592699 ~ 14598570 (-)
G128741 NA other upstream 1486123 15179241 ~ 15180322 (-)
AMCG00001118 hibch other upstream 1670949 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other upstream 1716052 15409170 ~ 15432330 (-)

Expression


Co-expression Network