AMCG00001090


Basic Information

Item Value
gene id AMCG00001090
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 14477042 ~ 14497619 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001090
ATGGAGTTCCAGGAGATGGTGTCTGTTCAGGAAGTCAGGACCGTGACAGTAAAAGGCCAACCTCCTAAATTTGTAAAGAAACTAGAGTCTTCAAAGATTGTGAAGCAACATGAAGaaCGCAAAATTCCACCTACTTTCACGAAAAGGCCTTCCGAATCCATCGAGGACACAGAAGGAAAACTCGTTAAACTAGAGGGTCGTGTTTCTGGCTCCCAGCCAATGAGCATTGCCTGGTTTAAAGATGAAGAGGAAATCCAAATCTCTGACTTTTATGATATAGTACCTTCTAAGCCAAAGGAACCgcaagaagaacaagaaattGACATCATTGAGCTGCTCAGGAATGTTGACCCCAAAGAGTATGAGAAATATGCTCGCATGTATGGAATCACAGACTACCGTGGTCTTCTTCAGGCAATTGAGTATCTGAAGAAAATGCGTGGAGATGAAACGCACAGAGTGcctGTCACTCTGGTGAAAGACATTGAGGATCAAACAGCAATTGTAAATAAGGAGGCGGTGTTTGAATGTGAGATCAAGATCAACTATCCAGAAATCAAACTTTCATGGTACAAAGGAACTGAAAAGCTTGATACCAATGAAAAGTATGACATCAGTATTGAAGAGCCTGTAGTGGAACAGCCTCTTCAACCCTTAGCTGAAATTGAAGAAGGAATACCTCCTGAAGAGATTGAAAGCTGGACAATTAAAGAGGAGAAAGTCACACAGGAAGTCACCATCACAAAAGGCCAGAAGAGGTTAGACCTGCTGCAGTTCCATCCCAAGAGGAGGCCCCTGCTGTGGTTAAAggtatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001090 True 816 mRNA 0.43 9 14477042 14497619

Neighbor

gene id symbol gene type direction distance location
AMCG00001089 LOC107698997 coding upstream 3543 14404322 ~ 14473499 (+)
AMCG00001084 sestd1,LOC106582273,LOC107699012,LOC107657508,LOC106586460 coding upstream 77283 14372427 ~ 14399759 (+)
AMCG00001083 znf385b coding upstream 125564 14343748 ~ 14351478 (+)
AMCG00001085 znf385b,LOC107657507,LOC107699013,LOC107717003,LOC107601623 coding upstream 144017 14328300 ~ 14333025 (+)
AMCG00001082 cwc22,LOC107699014,LOC107676081,LOC107601622,LOC106586461 coding upstream 212989 14225730 ~ 14264053 (+)
AMCG00001088 NA coding downstream 25045 14522664 ~ 14602340 (+)
AMCG00001086 NA coding downstream 121904 14619523 ~ 14623851 (+)
AMCG00001087 LOC106581929,LOC108435067 coding downstream 199021 14696640 ~ 14728187 (+)
AMCG00001095 NA coding downstream 500398 14998017 ~ 15035581 (+)
AMCG00001094 calcrl,LOC103374150,LOC105905912,LOC104930425 coding downstream 563382 15061001 ~ 15070971 (+)
G128402 NA non-coding upstream 392112 14084286 ~ 14084930 (+)
G128294 NA non-coding upstream 1013560 13461666 ~ 13463482 (+)
G128255 NA non-coding upstream 1094398 13357491 ~ 13382644 (+)
G128171 atp5g3,atp5g2,LOC101062993,LOC105908030 non-coding upstream 1636034 12837651 ~ 12841008 (+)
G128107 ola1,LOC107660044 non-coding upstream 1800868 12638985 ~ 12676174 (+)
G128662 NA non-coding downstream 275999 14773618 ~ 14776723 (+)
G128663 NA non-coding downstream 279240 14776859 ~ 14779441 (+)
G128697 NA non-coding downstream 573454 15071073 ~ 15073902 (+)
G128747 NA non-coding downstream 712734 15210353 ~ 15211325 (+)
G128772 NA non-coding downstream 828375 15325994 ~ 15326220 (+)
AMCG00001022 NA other upstream 2092000 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 2465617 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 4322855 10100283 ~ 10154187 (+)
G127134 NA other upstream 5856847 8617199 ~ 8620195 (+)
AMCG00000848 NA other upstream 9011061 5461301 ~ 5465981 (+)
AMCG00001098 NA other downstream 652656 15150275 ~ 15184392 (+)
G128823 NA other downstream 911493 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 962913 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 3525441 18023060 ~ 18044251 (+)
G129453 NA other downstream 4048274 18545893 ~ 18547915 (+)

Expression


Co-expression Network