AMCG00001100


Basic Information

Item Value
gene id AMCG00001100
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15175172 ~ 15181842 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001100
AACGCCTTTTCCTTGTATCTGAGTTTTGCTCAGTTTGTAGGAATACGTGAATCCCGCCCAGATATTACCATAAACTTATTGGAAGACATCACACTGCCGTGAAAGTTACTGGAGAGAAATGGGTGATGCAATGGAATTCTCAGATGCTTCAGGAAGAAATCATGGTGAATCAGCAGATAAGGAAAAATATGCAGGCCCAATCAGCCAGTCTGTGCTTAATGATGAGGGGAGTACTGTCGTTGCCCCTGTAATTACAAATTCTACAGTGACAGACATTAGTGTGGACATAGAAAGCTCAACTGCCAGCAAGTTAAACAACAAGCAGCCTGCGCCAAATAAGAAGAATTTCCTGAAGAACATATGAAATTAGTCCATAAAGTAACAAATGTGGATCCTGTAATTGACCAGATAAACGTCAGAGGCTTTTCTGCTGAAGCAGTTAAAAATATCAGAGCACCGAACTGGAAAAGATGAGGAAGATCCTGGATTACACAAGAAGTATCAAGGCAGCCGAGGAAGTGATCCTCTTTGTGAAAGACCAGTTcattaaataacttttattCAATTGTGTTATATATGGCTTTTCTATAGTGCAAaggcatttaaattaattgtatttaagttaatcaatatatatacaaactagAAGTGCTTTTTTggcataattaaaatacatttctgttttgatatttttattgtatgatATTGGTATGAATAATGCAAGATACACATTTTGCAATGGATGTCAATTTAAGACCTATCTTTCAGGCAAAGCTCCATGTACCTTGATTCTTTATTGATTACATCATTACACAGGAAAGTCCACATTAAAAGTCTTAATCTACATTTGTATAATCTTAATgccaataatacaaattataataataattgtaaatactTCATTCATACTGAGTGGTATTTTGTTGAATGGGGATGTTTATTGGGA

Function

GO: NA

KEGG:

id description
ko00980 Metabolism of xenobiotics by cytochrome P450
ko00982 Drug metabolism - cytochrome P450
ko00983 Drug metabolism - other enzymes

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001100 True 946 mRNA 0.35 4 15175172 15181842

Neighbor

gene id symbol gene type direction distance location
AMCG00001097 NA coding downstream 176866 14995250 ~ 14998306 (-)
AMCG00001096 LOC105018745,LOC107657514 coding downstream 183792 14781206 ~ 14991380 (-)
AMCG00001091 NA coding downstream 413905 14732692 ~ 14761267 (-)
AMCG00001093 dfnb59,LOC102786563 coding downstream 547462 14624425 ~ 14627710 (-)
AMCG00001092 LOC107691396,LOC107582034,LOC107556426 coding downstream 556164 14611686 ~ 14619008 (-)
AMCG00001099 NA coding upstream 3270 15185112 ~ 15187506 (-)
AMCG00001105 NA coding upstream 25051 15206893 ~ 15209203 (-)
AMCG00001106 NA coding upstream 32463 15214305 ~ 15228862 (-)
AMCG00001104 slc40a1 coding upstream 59810 15241652 ~ 15251730 (-)
AMCG00001107 NA coding upstream 82832 15264674 ~ 15268201 (-)
G128703 NA non-coding downstream 101302 15071918 ~ 15073870 (-)
G128681 NA non-coding downstream 218120 14956841 ~ 14957052 (-)
G128676 NA non-coding downstream 399533 14773562 ~ 14775639 (-)
G128631 NA non-coding downstream 552039 14619572 ~ 14623133 (-)
G128624 NA non-coding downstream 572842 14589025 ~ 14602330 (-)
G128839 NA non-coding upstream 224926 15406768 ~ 15409154 (-)
G128890 NA non-coding upstream 280875 15462717 ~ 15463789 (-)
G128976 NA non-coding upstream 842316 16024158 ~ 16027580 (-)
G129033 NA non-coding upstream 1171593 16353435 ~ 16378315 (-)
G129042 NA non-coding upstream 1338339 16520181 ~ 16574599 (-)
G128628 NA other downstream 576602 14592699 ~ 14598570 (-)
AMCG00001068 LOC107576050 other downstream 1401294 13767541 ~ 13773878 (-)
AMCG00001061 cycsb,LOC108273362,LOC108430847,LOC107740584 other downstream 1815402 13356983 ~ 13359770 (-)
G128160 wipf1 other downstream 2423656 12732184 ~ 12751516 (-)
AMCG00001039 NA other downstream 2442571 12725694 ~ 12732601 (-)
AMCG00001118 hibch other upstream 182225 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other upstream 227328 15409170 ~ 15432330 (-)
AMCG00001127 NA other upstream 337774 15519616 ~ 15909126 (-)
AMCG00001156 NA other upstream 1944517 17126359 ~ 17187630 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 2332544 17514386 ~ 17521270 (-)

Expression


Co-expression Network