AMCG00001112


Basic Information

Item Value
gene id AMCG00001112
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 15351085 ~ 15351360 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001112
ATGGGATGCATCAAATCAAAGCAGAACAACCGGACTCAGAATGCCAACTCCGTGGAGAAAGCAGACGGCAAGCCGAAGAAGTGCGTGGACGAGAAGGCGACCCTGGTGAACGCCGAGGCCCAGCAGGACGGGGCTGGCTCTCCGCAGGTCAACCCCGTCCTGCTCGACTACGCTCAGCGTCTGTCCGAGGAGATTGTCAGCAAGGCGGTGCAGCAGTGGGCAGAAGTGGACAGCAGGTACAGCGACATCCCTTACATAGAGAGTGACGTGCCCTGA

Function

GO: NA

KEGG:

id description
ko04727 GABAergic synapse

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001112 True 276 mRNA 0.59 1 15351085 15351360

Neighbor

gene id symbol gene type direction distance location
AMCG00001109 NA coding upstream 27446 15318950 ~ 15323639 (+)
AMCG00001108 NA coding upstream 32647 15295104 ~ 15318438 (+)
AMCG00001103 NA coding upstream 67982 15269252 ~ 15283103 (+)
AMCG00001101 NA coding upstream 87075 15261751 ~ 15264010 (+)
AMCG00001102 NA coding upstream 109995 15229871 ~ 15241090 (+)
AMCG00001113 cnot9,LOC103363318,LOC106575212,LOC106574282,LOC105022524 coding downstream 124464 15475824 ~ 15481816 (+)
AMCG00001121 plcd4a,LOC107739328,LOC107600964,LOC106575211,LOC103363317 coding downstream 135793 15487153 ~ 15499125 (+)
AMCG00001122 LOC107673730,LOC107555925,LOC107714219,LOC107741911 coding downstream 160151 15511511 ~ 15518433 (+)
AMCG00001123 NA coding downstream 167113 15518473 ~ 15524200 (+)
AMCG00001120 NA coding downstream 174486 15525846 ~ 15529959 (+)
G128772 NA non-coding upstream 24865 15325994 ~ 15326220 (+)
G128747 NA non-coding upstream 139760 15210353 ~ 15211325 (+)
G128697 NA non-coding upstream 277183 15071073 ~ 15073902 (+)
G128663 NA non-coding upstream 571644 14776859 ~ 14779441 (+)
G128662 NA non-coding upstream 574362 14773618 ~ 14776723 (+)
G128815 NA non-coding downstream 7283 15358643 ~ 15359014 (+)
G128827 NA non-coding downstream 61420 15412780 ~ 15413107 (+)
G128919 NA non-coding downstream 215041 15566401 ~ 15886602 (+)
G128928 NA non-coding downstream 529995 15881355 ~ 15882299 (+)
G128938 NA non-coding downstream 570013 15921373 ~ 15921574 (+)
AMCG00001098 NA other upstream 166693 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 2966043 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 3339660 11999664 ~ 12011425 (+)
AMCG00000949 NA other upstream 5196898 10100283 ~ 10154187 (+)
G127134 NA other upstream 6730890 8617199 ~ 8620195 (+)
G128823 NA other downstream 57752 15409112 ~ 15420880 (+)
AMCG00001114 NA other downstream 109172 15460532 ~ 15463853 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 2671700 18023060 ~ 18044251 (+)
G129453 NA other downstream 3194533 18545893 ~ 18547915 (+)
G129442 NA other downstream 3203791 18555151 ~ 18558174 (+)

Expression


Co-expression Network