AMCG00001138


Basic Information

Item Value
gene id AMCG00001138
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16276435 ~ 16285796 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001138
aatcaatcaaacttTCAATCTGGGTTCGGCTGCATCTCTTTTAACACGTGAGATTAGCCATAAGGATACACGCGTCTTTACATCTATTGAACTAACTTCAATATATCGATAAAGAGTCTGATTAGGACAGTAATCGATGAGTCCAAATTATGTCgttttttggttttgacaaTAAACATCAGAGATAGAGAGTCGGTCACGCTGACAACTTTTTAGTGTAAACATTCATAAACTGTGTGGCAGGGATCCCACTAGGCACATAGGATCGGACAGCATGGAAAACACAGAAGAAGTTGCTGTAGATTTACACGGGGATGAAGAAATAGTGGAAGTGATCGAGCTGAATGAAACCGAACAGACCCCAGACGACTTGGCTGAAGAGCTGGAAGATGTGGATTTTGAGGAGGAGGACGGAGACGGGAATGTGGCGGACGATGAGGACTGGCAGACGGAAGATGAGGACATGGAGGCGGGCCAGGACGACAGTGAACTCACCTTCTCTAAACACACAGgctctgttttctgtgtaaatTTAGACCCGGCCACTAACAGCTTGGCAGTGACTGGCGGTGAAGATGACAAGGCTTTTGTTTGGAGGGTGAACGACGGAGATGTGGTCATGGAGTGTACAGGACACAAGGACTCTGTCATCTGTGCAGCCTTCAGCCACGATTCGACACTTGTGGCCACAGGGGATATGGGTGGCCTTATAAAAGTGTGGAAGGTGGAAACCAAGGGGGAGATCTGGTCCTTTGAGGTGGGAGATCTGGAGtggaTAGAGTGGCACCCTTGTGCCCCTGTCCTGCTCGCTGGTACAGCAGACGGGAACATGTGGATGTGGAAAATCCCCAGCGGGGAGTGCAAGACGTTCCAAGGGCCTGGCTGCCAGGCCACCAGTGGGAAAATCCTGCCCGATGGAAAGCGAGCGGTAGTTGGCTATGAAGATGGAATAGTCAGACTGTGGGACCTGAAACAGGGCAATGCCATCCATGTACTGAAAGGACCGGATGGGCACCAGGGTTCCCTGACCTGTATGGCCTGCAACAAAGATGGCAGCCTTGTGCTGACTGGCTCGGTGGACTGCAGGGCCAAACTCATTAATACTGCCACAGGAAAGGTTGTGGGCGTGTTCTCGGAGGAGGGGAACAAACCTCAGAGCTCAATGGAGGAAGAAACTCGGTCGAACTCTGTGGAGGCTGTGGGATTCTGTAACGTAATGCCTTTGGCTGCGGTCGCTTACCTGGATGGGACTTTAGCCATCTATGACCTTCCAACACAGAGTCTGAGGAACAAGTGTCAGCATGAGGCCGGCATTGTTCATCTCCAGTGGGAGGAGAGCTCTTCGTTGGTGTCCACCTGCAGTCTGGACGGGGCAGTGCGGATCTGGGATGCTCGTTCTGGTGACATGGTGTCAGAGTACCATGGGCACACAGCCGAAATCCTCGACTTCACCCTCAGCAGGGATGCTTCTCTGGCAGTTACGGCTTCGGGAGATCACAAGGCTAAAGTCTTCTGCCTTCAGAGACCAGACCGGTAAAAAGGAAGTGCGTTGGCTTGTCGTGCGGTACTGGCAGTTATACATCTTTCCCGAGGAGCATCAACAGATAAATGTGGACAATATGACATTGCTGGATAATAAGTCTGGTACATAACATTTGGTTTACGTCTAAAGCATTAATCCCGCTGCAGACGTATCTAAATGTCATTGTTGGTTAGGTATTCTTCTCTACAGACGAATCTCTCTGTGTCAGGTTcaaatcctgtgtttttttcattttttaattgattctcGGTTTGTGGAAAACACATCTGAGATAACAACAGATCCTACAGCCGACAAAAAAGCAGACAATCTGGTCAATTGAAAATGTACTCCTGGTAAATGCAGAGATAAAAAGCTTCAGGGCAGGCTTGTTTTGACAGTGAACAGCATTTCCTCTTGTAGATATCAGTTTTAAGATCATAGTTACAGCCTGAATAAACTTATAAACAGCTAATCCCAGCTatataagtattttgttttgtggtttgagATTTAAGAACCTATTCATTCAATTGAAAGCTTCCAGTGATAAAGGCTGACATCCACAATCGAATAGAAATGCAGGCTGAAGTCCATTTTATTGGGAGTAGCGTGGGGGAGGGAGTCTGTGCATCCAAAAGGGTAAAGCAGCTTGTTTATGAACCACATGCAGCCATGATGTCAAAGTTAATgcagtgtaaataaatgtgctcCTTATCTCGTCGACTAAATACCATTAAAAGATTGTTTAAGAAAAGCTCTGTGCTGGTTTAACTTCCCTGGTCTTTATAAGCCTTGCTGGAGCGCACTGCAGGAACTGTCAGTCGGTCATTAGTTCACCTAGCTGCTGAAGAACAGTTTAGAGTAGcatctgtatttattgtgttttgtgtgtgtgtgtgtgtaaattagGTCAGTCTTCCTATACAGTTCTGTGTGTCCTAGTGTACATGCTTGCaaatatatcaatcaatcaatcaattttgatttgtatagcgcccttcacaaataaacctttaactgaaaaccaatattaaataaacttgtatatttataatcagTATGAATCAATTATGAAATCAGCTTGTACTTATTTAGAAAGATATCCaatataaacttttaaattCAGTGAAACTCTACTTATGCACAACAACGACAAAACAACGTGGTTAAAAgttaaaagattaaaattagCTATTTTGAACAATTTAACCTGGTTAGTAATTAGTTTCAATTGTCTTAGTGTACACATCATACATACCAAtctcagtattttatttgtacagcgTAGTCTAATCCCGTATGAAAACGAATAGAGAAGCATTTGGAAATCGGCCATGAAATCTAGTGAAGAAaccaagtttttatttttatgacctTCACCTTCTGTAATCAGGAAATGAACCATAGATGGTTAACACTTTCCAAACCCATTGGTTGCCATGCCAGGGTGGAAAGTGGACCATCTTTAGTGCTTACTTGGAGTgataatgtgtttgtgtctaaaaattaaatgacaaatagGAGTTGTGGCAGTTTACCCTtttctatagtttttttttttttgtactacaAGAGGAAAGTACTGTAGATAGTCAATAAATCTACACTatgcagtatacagtatatgggCATCATGAGAGAAGCATATACTGTTATGATCCATCATATGAAGTCATCTGTGAATGTTTCTGTTTGGAAGCAATGAATGTCACAGGTTGCCTGTCACTAAATACTAATAGCAGTGGCCATAGTTAACTTGGCAACACCTAgacagaggttttttttttttttatcagtcaTCAGTCAGGTTTATGAAAGATACTTTAATTCCTGGACTCGGCAGACGTGTTCAGAACCTGTTTTTACTTTGCTTTGCTATGTGGTCATTTGCACGTGTTACCAAAAAAAAGGGGCATTTGGAAGCaacgttttttatttgtttgtttatttgaagcaCTCCAGGTGTCAGTTAAGCTTTTACCAGTTCacctttccatttatttttatggcataaattctttttgttcttttcaaatCTCTCTATCGGAAATACCCCTGGGaatgtttgtgttgctttttaaacaaGAGTAGGAGCTGGTGTATCTCTCCTGCTGAAGAGAAGAATTGCATGTCTTTaggttttcattattatgaCACTTTAGTTAAATGATGAGCCTGTGTGACACGTAAACCTGGCCTGTTAGACCACCAGGCATGATTGAATACCAAAGGAACACTTAACTCACAAGTCTACACACTACATTAACTGAAGTGTCAGTAATTATCCACACCAAACcccaattttttatttatttatggtttattatCTACTTTATTTGAACTTATTCTCATCACTTAATGGAATAAAAGgataacaatacaaattataaaatgcataaatatgaTAGAAAGGAGAAATGGCATTTGAAACTTATATTAATACAAGATTTAGCATCCGCTTCTCGCATAtgatctatttatatatttatgaaagcaTTTGTGCTCCAAATAAGCATTTGAGTGAGTATTTCTGCCATTTCCAATGCATTAGGCTGCTTTGCATCTACACGTAGATGATCAATGTAAGATAGCTCCttacattcaaattataatttaacaaCCTTTGTATGAAAGCAGGACAGCTGTTCTTTCCTTGCTCTTGATTTTAAAACTGAGCTTGTACCTCAGATGCTAATGAAACTGTTTGTGTAATTCGTGAAGATATTCTATGTATATTTATCACTTTACGTGTGCAGTTATCAAAGGTAATGTTTAAATGGCATGAGCAAGGCTTACTGTGACTGACAGGtagaaaagaaacatgaaagcTCAATGTATGCACTTCTTCACTGTTTTCATTGTCCATGCACTTAGCATTCagtgtcattttaaaagcactgaaaaAAGTTATGTatgcttaatacatttttccctaCTTCATGTCATTTGGGTAATGTCTTCCAGTTGGTCTGCGTGATGCATTGATATCCATgtacttaatgtatttttaaggaatttaaagaaaagcaatatgTTAGCTGGGatgctgtattttaaacagaagtCTGTCTGTGACTGGAAAAGGGAGTGATCTGATAAATGACTTTATGGTAATGGACGTCTGGCACCACATGCACTTGTCTGAATTGTTAATGAACAAGTCCATATGTTTATTAAAAGTTGAAGAAGCCAGCTATAAGACATTCAGATCTAAACACTACAGAAGATCTGGACTCAATGTTCACCGATGGTGCCAAGCTGTGGGATGCATCTGTGATAAGTCATAGTATCGCAAAAAGGCTCATTTGGTTGTTATCCACAGCCTGGTATCACCAGTACTAAGTTTTAAGGTTTTACagcatgtatttttcatatagaTGTTGTCGCTCTCTGTGCATTGTTACCATCAACTCCTGGCCATTGGTCCATTAAATAACGTAATGGAGCTGATAATGACTTGTGTAATGGAATGGATCCGAATGGTGGCATGGTGGATTGtgttatattttaagttattttgcaCCTGGCCTTAGTTTTCCctgattgaaataaaatattgatgagATAAAGACTAAGATGGTCATTCAAATGCATCCAGGGATGGGAG

Function

GO: NA

KEGG:

id description
K24725 AAMP; angio-associated migratory cell protein

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001138 True 5132 mRNA 0.40 11 16276435 16285796

Neighbor

gene id symbol gene type direction distance location
AMCG00001134 twist2,LOC106586121 coding upstream 267948 16008005 ~ 16008487 (+)
AMCG00001135 NA coding upstream 274283 15989172 ~ 16002152 (+)
AMCG00001130 asb1 coding upstream 318426 15953715 ~ 15958009 (+)
AMCG00001129 traf3ip1 coding upstream 325432 15931726 ~ 15951003 (+)
AMCG00001128 adarb1,adarb1b,LOC106581860,LOC106586125,LOC105907970 coding upstream 476278 15754698 ~ 15800157 (+)
AMCG00001142 NA coding downstream 644 16286440 ~ 16290299 (+)
AMCG00001139 NA coding downstream 20535 16306331 ~ 16311402 (+)
AMCG00001140 NA coding downstream 45073 16330869 ~ 16332913 (+)
AMCG00001141 NA coding downstream 60922 16346718 ~ 16354498 (+)
AMCG00001147 tns1 coding downstream 224453 16510249 ~ 16526322 (+)
G128958 NA non-coding upstream 214256 16022258 ~ 16062179 (+)
G128941 NA non-coding upstream 351625 15923032 ~ 15924810 (+)
G128939 NA non-coding upstream 354396 15921674 ~ 15922039 (+)
G128938 NA non-coding upstream 354861 15921373 ~ 15921574 (+)
G128919 NA non-coding upstream 389833 15566401 ~ 15886602 (+)
G129071 NA non-coding downstream 603842 16889638 ~ 16892361 (+)
G129080 NA non-coding downstream 858394 17144190 ~ 17147069 (+)
G129221 NA non-coding downstream 1201596 17487392 ~ 17550791 (+)
G129255 NA non-coding downstream 1405711 17691507 ~ 17692526 (+)
G129343 NA non-coding downstream 1686213 17972009 ~ 17976936 (+)
AMCG00001114 NA other upstream 812582 15460532 ~ 15463853 (+)
G128823 NA other upstream 855555 15409112 ~ 15420880 (+)
AMCG00001098 NA other upstream 1092043 15150275 ~ 15184392 (+)
AMCG00001022 NA other upstream 3891393 12288950 ~ 12385042 (+)
AMCG00001002 myo3b other upstream 4265010 11999664 ~ 12011425 (+)
G129365 zgc:162707,LOC107749877,LOC107592986,LOC107668408,LOC107596553 other downstream 1737264 18023060 ~ 18044251 (+)
G129453 NA other downstream 2260097 18545893 ~ 18547915 (+)
G129442 NA other downstream 2269355 18555151 ~ 18558174 (+)
AMCG00001203 NA other downstream 2602488 18888284 ~ 18889724 (+)
G129594 bzw1a,LOC108414345,LOC105905677,LOC103358003 other downstream 2757508 19043304 ~ 19142145 (+)

Expression


Co-expression Network