AMCG00001145


Basic Information

Item Value
gene id AMCG00001145
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16395035 ~ 16399430 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001145
ATGAAGGTGCTGATTCATAAAAGGTATAAAAACCTGGGCCCTGCAGTGCATTCAGTACAGAAGGAGGACACGGCAAAATCATGGCCAAGTGTCTCATTCTCGGTTTGGTTTGCCTGGCTCTTGCAGAGGGACTCGTCAGCAATGCATCCACTCTTTGACCCAAGTCAGTCATCCACCTATTACAGCAACAACCAGCCCTTCTCTATCCAATATGGGACAGGGAGCGTTTCTGGGGTGATTGGCTATGACACTATCACTCTCGAGGACTTCACCGTTACTAACCAGAAGATTGGCCTGAGTAGCCAGGAGCCAGGGAGCCACTTTGCAAGACCACTGCACGATGGCCTCATGGGCCTGGCCTTCAAGCAGGGCCAAGGAACCATTGTGGACACCATGATCAAGGAGAACCTGCTTGAGGAGCCCGTCTTTGCTTTCTACCTTAGCAAGAACTCTGGACGGACCAGTGAGGTGACATTCGGTGGCACAGATCCTTCCCAATATACTGGAGAGATCCACTGGGTTCCCGTTGCCGCGGAAAGCCACTGGCAGCTGGTGTTTCAAGGGTTTGAGGTCGACCACCAGAGTACTGGCTGGTGCCAGGGAGGTTGCTCGGCGATTGTGGACACTGGGACCTCTCTGCTGACCTGCCCGCCCCAATATGTACAGGAGCTCCATCAGCAACTTGGGGCTCAGCAAGATGAGAATGGACATTACGTCTTTGAATGCGACAGCATCAGCAGCCTGCCAACTCTGACATTTGTTATGAATGGAGCTCACCTACACCTGGAGCCCTCTGCCTATGTATTCCAGggcTCTGGTACATACTGCGAGAGTGGAATTGAAGCTTCCCATGAGGAATTCCGAGATGGGATGCCCTTCTGGATACTGGGGGATGTCTTCCTCAGGGAATTTTATTCAGTCTTTGACCAAGGCAATGCCAGGGTGGGATTTGCAACACTTGCTTAG

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001145 True 966 mRNA 0.52 7 16395035 16399430

Neighbor

gene id symbol gene type direction distance location
AMCG00001144 arpc2 coding downstream 73299 16311684 ~ 16321736 (-)
AMCG00001143 NA coding downstream 89352 16297028 ~ 16305683 (-)
AMCG00001137 NA coding downstream 119561 16260396 ~ 16275474 (-)
AMCG00001136 hdac4,LOC107560613 coding downstream 292287 16027645 ~ 16102748 (-)
AMCG00001131 NA coding downstream 468265 15922391 ~ 15926770 (-)
AMCG00001150 NA coding upstream 457724 16857154 ~ 16872727 (-)
AMCG00001151 NA coding upstream 495413 16894843 ~ 16934576 (-)
AMCG00001155 LOC107586362 coding upstream 599187 16998617 ~ 17000562 (-)
AMCG00001160 NA coding upstream 914635 17314065 ~ 17320529 (-)
AMCG00001164 NA coding upstream 1041286 17440716 ~ 17486990 (-)
G129033 NA non-coding downstream 16720 16353435 ~ 16378315 (-)
G128976 NA non-coding downstream 367455 16024158 ~ 16027580 (-)
G128890 NA non-coding downstream 931246 15462717 ~ 15463789 (-)
G128839 NA non-coding downstream 985881 15406768 ~ 15409154 (-)
G128703 NA non-coding downstream 1321165 15071918 ~ 15073870 (-)
G129042 NA non-coding upstream 120751 16520181 ~ 16574599 (-)
G129065 NA non-coding upstream 476881 16876311 ~ 16880485 (-)
G129125 NA non-coding upstream 524281 16923711 ~ 16995408 (-)
G129126 NA non-coding upstream 541237 16940667 ~ 16941282 (-)
G129213 NA non-coding upstream 932030 17331460 ~ 17331681 (-)
AMCG00001127 NA other downstream 485909 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 961566 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 962705 15409170 ~ 15432330 (-)
G128741 NA other downstream 1214713 15179241 ~ 15180322 (-)
G128628 NA other downstream 1796465 14592699 ~ 14598570 (-)
AMCG00001156 NA other upstream 726929 17126359 ~ 17187630 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 1114956 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 2125303 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 2155805 18555235 ~ 18558217 (-)
G129566 NA other upstream 2489335 18888765 ~ 18889757 (-)

Expression


Co-expression Network