AMCG00001150


Basic Information

Item Value
gene id AMCG00001150
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16857154 ~ 16872727 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001150
CCCCTTAAAGTAATGGTgatattaatgtattcaatgtATAGTTTCAGTACACATAGTATAGTAAGCATTGttcattttcatcctcatcctcctcctcatcatcaGGGGTCATTGCAAGCCCCTGTGAGTTGTTTCTCTTCTCGCTAGATGGCCAAAGGAGATGTTTGCGCCTCTAGAGGAACCTGTCAGGTGATAGGACCCTGCAGAAGCCACTGCGGCGCTTCACCTGTCTGCCCCTCCAGTTACTTTTCCACCTGAAACTGGGCTCAGTCGTTTTCCTCCAGCGCCGCATCGCTACAGCCGCAATGATCTCCTACTTTAGCTGCAGCCTGCTGTTGGCATCGCTGGCATTCCCGGGCACCCTGTTGGCGGAGGTGGTGTTCCGATGCCCCAGCTGCACCGCTGAGCGCCAGGCGGGCTGCCCGAAACTGGCCACCACCTGCGCGGAGATAGTGCGGGAGCCCGGCTGCGGCTGCTGCCCGGTGTGCGCCCGGCTGGAGGGCGAGGCGTGCGGCGTGTACACCCCCCGGTGCTCCAGCGGGCTGCGCTGCTACCCCAAGCCCGAGGTGGAGCTTCCCCTGGAGGAGCTGGTGCAGGGCTCTGGCCGCTGTGGGAGAAGAGTGGACGAGGAGACGACAGGGAGTCCCCACAATGCAGCTGATAGTGGAGAAGTGCAGTACCAGTCTGAGGTGAGCCCGACAGACAACGAACCTGAAGACAGGAACACGAATGGTCCACGGTTAAAACCAAATCCAAAGACTGCAGCCATTCGTCATCATCAATTAGTGCAGGGTCAAAAGTGGTTCAGAATCAAaattcaggaagaaaaaaagctaCGTCCGAAGCTGAGTAAGTGCCAACAGGAGCTGGACAATGTTCTAGAGAGGATTTCCCAGATGCCCTTCAGTGATGACAGAGGACCCCTGGAGCACCTGTATGCGCTACACATCCCCAACTGTGACAAGCGAGGGCAGTATAACTTAAAGCAGTGCAAGATGTCTTTGAACGGGCAAAGAGGCGAGTGCTGGTGTGTAGATCCCCACACCGGAAACCCCATCCCAGAATCCCCTATGGTGAGGGGGGACCCCAACTGCATTCAGTACATCAGTGGGCTGCAGACCGAGCCTCCCGTGGTGCCCCAAAAATAGTGTGTTTTCCAGCAAACCTACAAACACTAGGATTACATAAAGTTATGCAAACACAGATGTGTGTCTATAGTTTTGTTTGGTACaatgtataaacatatacagTCAAACCTCAAGTATATCACATGGAAACGAGAGCCAAGAGATGTGGCATATCAGGTTAAGCAGAGAACAGGAAAGCGGAGGCAAGCCAGCATGGACAAAAGCCCAGatagaaaactttaaataaGGATACAAGACTGAGAGTGTCTTATCCTATTCATAGAGTGTACACTTTAAATAACACAGAGACCAGACACAATTGTCTTTCAAATCTACATCTGGTTGTATAGGTATTTAAGGCAGCCTAGCCCTTCATTTGTGCAGCTGCTATCACTCAAGACAAATTTCTGTTTACTCAACTTTCCCCCTTTGGCTCTTCAGCAAATGTACGCTGTATTTAAGCAAAGCACATTCTATCCTAACAGCCCCCCACACGTTTTTAAACCCTCAAACTGAATAACCGAAATGTCCTTTCAGATTGTAAAGTCTTTCAAAGTTCTTTCTttgaaacataaacatattttgacAGTCTTTCATCACaaccctctcctccctcccttccgCTCCACCAAGTACGTTTCTTCTCACTTTGCTGTCAACATCCCCCTCTTTGCCTTGCACCTCTCATCTCTAAACTACAGTGCAAACCTTGACACGGCTATTGTGCCCAGCGAAAAGAAAAGCGCTGCCAGATTCGTCACTGAGGCTTGTGTTAGAGAATGAACGCACAATGCTTGGCGGCTAAAATAACCCCGTTCCCCAGGCCCCTCTGTACTGTAGAGTCATGTGGCATTTTCCAGGGGAATTACTAATGAAGTGCTGACAGAAAATGAGATTAGGAGAATGGACTTGACACTGACAAATGTGATATTAAGTGGGTTTGActatatataatcaaatgttTGCAAATATGTTTGCGCCATGCTGCCTGACTGTACAACTAGGTCTGGGTTGTAATGAAGAAGCCACCTACTGtctggtgcccaacacctctgAAGAGAAATCACGTTCTTTGCAGGTTCAGGGCATTTTTTAGGGTTAAACTTCAGTATCCTTCCCATCGAGGGAGAACAATTGAATAACTATTAAATTACAGCCCCCTTACAATTCAGTAAACACAAGATCACCATGGAACGTCACTAATGGCTTCATCATTTCAATCCAGGCCCAGACCATATCAATACGTTGAGCCTCCCACCAATTGGCGATTATAGATCCTTTACTTGATGGTGGCTTTTTTGTTTGGTAAAGGATTCTTCCTTGTAAGGCAAACCTACCAACAAGTGCTTATTTTGAATTTTTGATTGAGCTGTTGGGTCCAAGTTTTTATTCACTCAGGGCCCTAATATGTAGAAGATCAGTCTCTAGTTGTATAGATATTTAcgggaataaataaaaaaatgaccaaatttacactgttgttatttgttttctagaTAACTCTGgttatgtttttgttgcagattttttgttgttgttgtttgggggtggggggggaagttggtgtttatttttattatgtcaGCACTtgataatacaatatatttcactgCAGTGAGCTTGGCCTAGTTTAAAACACATCAGGAGCTAATCTCTGTGGTTCAAACATTGATCTGCCAGTACTGTTACAGAGGAAAGTGCTTTCTCCGGATCATTTGGATGTTTTGCTGTTTGGTGTCTTTATCTGTCACTCTtagtgtttcttttattttaactgcattGTTTCAGTGAcggaataataaaaacaaagcatggACAATACTGTACACATCTTTTAGGGAGAACATTTACAAACGGAAAAGTTAcaattagatttatttacaaaattaattttcttttattcacATGTAGTCTGTAGTGACAATGGATAGAAGGCttttattggaaaataaagTAGAAGGCGTAATTCCTTGAGAAAATCCAAG

Function

GO:

id name namespace
GO:0043567 regulation of insulin-like growth factor receptor signaling pathway biological_process
GO:0007507 heart development biological_process
GO:0008156 negative regulation of DNA replication biological_process
GO:0001525 angiogenesis biological_process
GO:0008285 negative regulation of cell population proliferation biological_process
GO:0048640 negative regulation of developmental growth biological_process
GO:0040015 negative regulation of multicellular organism growth biological_process
GO:0005576 extracellular region cellular_component
GO:0031994 insulin-like growth factor I binding molecular_function
GO:0031995 insulin-like growth factor II binding molecular_function

KEGG:

id description
K23575 IGFBP2; insulin-like growth factor-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001150 True 3112 mRNA 0.45 4 16857154 16872727

Neighbor

gene id symbol gene type direction distance location
AMCG00001145 NA coding downstream 457724 16395035 ~ 16399430 (-)
AMCG00001144 arpc2 coding downstream 535418 16311684 ~ 16321736 (-)
AMCG00001143 NA coding downstream 551471 16297028 ~ 16305683 (-)
AMCG00001137 NA coding downstream 581680 16260396 ~ 16275474 (-)
AMCG00001136 hdac4,LOC107560613 coding downstream 754406 16027645 ~ 16102748 (-)
AMCG00001151 NA coding upstream 22116 16894843 ~ 16934576 (-)
AMCG00001155 LOC107586362 coding upstream 125890 16998617 ~ 17000562 (-)
AMCG00001160 NA coding upstream 441338 17314065 ~ 17320529 (-)
AMCG00001164 NA coding upstream 567989 17440716 ~ 17486990 (-)
AMCG00001167 ube2g2 coding upstream 614670 17487397 ~ 17496135 (-)
G129042 NA non-coding downstream 282555 16520181 ~ 16574599 (-)
G129033 NA non-coding downstream 478839 16353435 ~ 16378315 (-)
G128976 NA non-coding downstream 829574 16024158 ~ 16027580 (-)
G128890 NA non-coding downstream 1393365 15462717 ~ 15463789 (-)
G128839 NA non-coding downstream 1448000 15406768 ~ 15409154 (-)
G129065 NA non-coding upstream 3584 16876311 ~ 16880485 (-)
G129125 NA non-coding upstream 50984 16923711 ~ 16995408 (-)
G129126 NA non-coding upstream 67940 16940667 ~ 16941282 (-)
G129213 NA non-coding upstream 458733 17331460 ~ 17331681 (-)
G129273 NA non-coding upstream 838170 17710897 ~ 17761905 (-)
AMCG00001127 NA other downstream 948028 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 1423685 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 1424824 15409170 ~ 15432330 (-)
G128741 NA other downstream 1676832 15179241 ~ 15180322 (-)
G128628 NA other downstream 2258584 14592699 ~ 14598570 (-)
AMCG00001156 NA other upstream 253632 17126359 ~ 17187630 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 641659 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 1652006 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1682508 18555235 ~ 18558217 (-)
G129566 NA other upstream 2016038 18888765 ~ 18889757 (-)

Expression


Co-expression Network