AMCG00001151


Basic Information

Item Value
gene id AMCG00001151
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16894843 ~ 16934576 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001151
ATGTCGGGGATGAGGACGTGGATCGAAAGAAGGAAAACTGAAACTAAGATTGTGCGTAATAAGAGGCCATTCCACAGCTGCCAGAAACTTTGCAGAGACTATGAGGGGCAACAGCCCTCTCATGCCCTCTTCTCCAATTTGGAGATGAGAGAGGAGTTCTGTAGGATCTGCTCGGGTTATGCCACCCCACAGGTTCACTGGAAACCCAACAGTGAAAGAGAAGGGCTGATCCCAGGACTCCGCGCTTCCCCTGGTGTCCCCTGTCTAAGCATGGCGGCAGGAGGTGCGGCCCCCGGGAGTGATGTGTTTATCAACCTGCATCAGGTTCTAGATGACGTTGAGAAGAGCTCCTCGAATGGACAGGAGGAAGAAAACTGGGAGAAGGCCTTGTCTGTGGAACGATTCGGGGATATCATTTTGGAATCCAGCTCGCGAAACGCTGAGAAAATGGGCCGCTGCTACAATGAGAGGGACTTTGAGTATCACCGTCACACCTTCCATCACACTCACCACCCCTTGTCCACCCACCTCCCTCCAACGCTACGGTTTCGGAAGAGGGTGTTTTGCCTGGATCGCCGCAAAAAGAAGAAACGCAAGAAAAAAAAGACGTCCATCCCTCCCTCTGACATCACGCCAACAATCCAGGAAGTAGATGAGGAGGAGGCGGAGTCTGAGACGGAGGGGCAGGGCCAGGTAGCCACACCCACCGAACAGGCAGACGACAAATCAAAGTTTAGCCTCGGCAGCGAAGACGATTTTGCACCCCCCCTGCCCTTCATGAGTTTCCACATAGAGAGTGAGTGCCCCCCGACCCCCAAGGAGGTTCCCTGTGGCATGACCAAGAGAGGCTGGTTTAGGAGGAAGCCTCTTCACCGGCTCACAGGGGGCCAAAGAGCGAGCTATGACCTTCGAGAAAGGATCTGCATCGGGAGCATGACGGCCATGGAGACTGCTGTCTACCAGAAAGTCCCCACAGATGAGGCTGAGGCCCAGATGCTGGCCAGCGCGGACCTGGACGACATGAAAAGTCACCGATTTGAAGATAACCCTGGAGTGCGGAGACACCTAGTAAAGAAACCATCTCGCAACCAAATAACTCGCACAAGCAACAGCTCCCCTTCTTCATCTAGCctcaagaaaaagaagaagattGACAAGAAGCCCCATGAGGTGTTTGTGGAGCTGAATGAGCTGATCGTGGACAAGAACCAGGACATGCGCTGGAAGGAGACGGCGCGCTGGATCAAGTTTGAGGAAGATGTGGAAGAGGAGACGGACCGCTGGGGGAAACCACACGTAGCCTCCCTCACGTTCCGGAGCCTTCTGGAACTCAGGAGAACCATCACCCACGGGGCCGTCCTGCTTGACCTCGAACAGACAACCTTGCCCGGTATCGCACACCTTGTGGTGGAGACCATGATCATCTCTGATCAGATCAAGGCCGAGGACAGAGCCAATGTCTTGCGGGCTCTGATGCTGAAGCACAGTCACCCCAATGATGAGAAGGATGGGTTCTTCCCACGCAACCATTCGAGCTCCAGCATGACTTCAGTCCAGACCAGCCTCCatcacaaccacaaccacacgCCAGAGACCTGCCTGCCCTTGAAATCAATACATCATCATAGCTCAGACTTGCATAAGACCAAATGCATAAAACTGCTGGAAAAGATACCAGACGATGCTGAAGCTACAGTGGTCTTAGTGGGCTGTGTTGACTTTCTGGAGCAGCCAGCTATGGCGTTTGTGCGACTCAACGAAGCTGTTTTCCTCGAGTCGGTCCTGGAGGTACCCATTCCTGTCCGATTCATGTTTGTGCTGTTGGGACCCAGCCAGTGCAACATAGACTACCATGAAATCGGACGCTCCATCTCTACCCTTATGTCTGACAAGCATTTCCACGAAGCTGCCTACTCTGCGGACGACCGCCAGGACCTTTTGAATGGTATTAATGAGTTCTTAGATTGTAGCATTGTCATCCCTCCTTCTGAAGTGGAAGGCAAGGACCTGCTCAAGTCCGTTGCGTCCTTCCAGAAAGAGATGCTGCGAAAGAGAAAGCAGAGGGAGAATAATAAGTCTGGGCAAAATGTGACGACTGGCCTTGTCCCTGAGGTAAAAGaagtgaGTGTGGAGGAGCGGCCGGAGGAGGTTGAGGACGATCCCCTGAAGCGATCTGGAATCCCTTTTGGGGGGCTCATACACGATATCCGCCGACGGTACCCCCGCTACCTGAGTGACCTGCGAGACGCTGTTCACACACAATGCCTGGCTGCCATTGTCTTCATCTACTTCGCTGCTCTCTCGCCTGCCATCACCTTCGGAGGGCTACTGGGAGAAAAGACAGAGGGCATGATGGGAGTTTCTGAGCTGATTATCGCTACCTCTACTCTGGGTGTCCTGTTCGCGCTCTTTGGTGGACAGCCTTTGCTGATTATTGGCTTCTCTGGACCTCTCTTGGTGTTTGAGGAAGCCTTCTATAAATTCTGCCAGGCCCAGGATTTTGAGTACCTCACAGGCCGTGTGTGGATCGGCTTCTGGCTGGTGTTCATCGTGTTTGTCATTGTGGCGGCAGAGGGCAGCTTCCTGGTTCGCTACATTTCTCCTTTCACCCAGGAAGTCTTCGCCTTCCTCATCTCCCTCATCTTCATTTACGAAACGTTCTATAAACTCTTCAAGGTGTTCAGCGACCACCCACTGTTGAGCTCCTACCCTCCGAACTCGCAGTCTTCCCTGGGGTCAATCAACCTGTCCCAGGTGGCCAGTACCACGGAGTCACTCGTGGGGATGCAGCCCAACACCGCTCTGCTGTCCCTGGTGCTCATGCTGGGCACATTCTTCATCGCCTTCTTCCTCAGGAAGTTCAGAAACAGCAGGTTCCTGGGAGGGAAGGCTAGAAGAATAATTGGAGACTTCGGAATCCCAATTTCAATCCTTTTTATGGTGTTTGTGGACTACTCCATTACAGACACTTATACACAGAAGCTGAATGTGCCCTCTGGTTTCTCCGTTACCTCCCCAGAAAAGCGAGAGTGGTTTATTAACCCAATGGGGAACAAACAGCCTTTCCCCATTTGGATGATGTTTGCCTCTGCAATTCCAGCCCTGTTGGTGTTCATTCTCATCTTCATGGAGACTCAGATCACCACCCTGATTGTCAGTAAGAAGGAGCGCCGTCTGGTCAAGGGGTCAGGGTTCCACCTGGATCTACTACTGATTGTCACTATGGGGGGGATCTGCCCCCTTTTTGGGCTGCCCTGGCTGACAGCTGCCACAGTCCGCTCTGTCACTCACGTCAATGCCCTGACAGTGATGAGTAAAGCAACCGCCCCTGGGGAGAAACCCCGAATCAGAGAGGTGAAGGAACAGAGAGTGACGGGCATGATGGTGGCAGTGCTCGTGGGCCTCTCTATTGTCATGGCGGACGTCCTGCGTCTGATCCCACTGGCTGTGCTCTTCGGGATCTTTCTGTACATGGGTATCACCTCCCTCACGGGGATCCAGCTTTATGAACGCATCATGCTTATGGTCACTCCGTCCAAACACCATCCCGACCACATCTACGTCACCAAGGTGAAGACGCGGCGCATGAACCTGTTCACCTGCATCCAGCTGGGGTGCATCATTGTTCTGTGGGTCGTGAAATCTACAGTGGCTTCCTTGGCCTTTCCCTTTGTCCTGATCATGACCGTCCCCCTCAGACGCTTCATCCTTACCCGAATCTTTGAAGACAGAGAGCTTAAGGCTctGGACTCCGATGAAGGTTCTCCAAATTTTGATGAGGATGGTCAGGACGAATACAACGAGCTGCACATGCCTGTATAG

Function

GO: NA

KEGG:

id description
K13856 SLC4A3, AE3; solute carrier family 4 (anion exchanger), member 3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001151 True 3822 mRNA 0.53 25 16894843 16934576

Neighbor

gene id symbol gene type direction distance location
AMCG00001150 NA coding downstream 22116 16857154 ~ 16872727 (-)
AMCG00001145 NA coding downstream 495413 16395035 ~ 16399430 (-)
AMCG00001144 arpc2 coding downstream 573107 16311684 ~ 16321736 (-)
AMCG00001143 NA coding downstream 589160 16297028 ~ 16305683 (-)
AMCG00001137 NA coding downstream 619369 16260396 ~ 16275474 (-)
AMCG00001155 LOC107586362 coding upstream 64041 16998617 ~ 17000562 (-)
AMCG00001160 NA coding upstream 379489 17314065 ~ 17320529 (-)
AMCG00001164 NA coding upstream 506140 17440716 ~ 17486990 (-)
AMCG00001167 ube2g2 coding upstream 552821 17487397 ~ 17496135 (-)
AMCG00001163 NA coding upstream 588876 17523452 ~ 17537225 (-)
G129065 NA non-coding downstream 14358 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 320244 16520181 ~ 16574599 (-)
G129033 NA non-coding downstream 516528 16353435 ~ 16378315 (-)
G128976 NA non-coding downstream 867263 16024158 ~ 16027580 (-)
G128890 NA non-coding downstream 1431054 15462717 ~ 15463789 (-)
G129126 NA non-coding upstream 6091 16940667 ~ 16941282 (-)
G129213 NA non-coding upstream 396884 17331460 ~ 17331681 (-)
G129273 NA non-coding upstream 776321 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 844340 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 1037433 17972009 ~ 17976917 (-)
AMCG00001127 NA other downstream 985717 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 1461374 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 1462513 15409170 ~ 15432330 (-)
G128741 NA other downstream 1714521 15179241 ~ 15180322 (-)
G128628 NA other downstream 2296273 14592699 ~ 14598570 (-)
AMCG00001156 NA other upstream 191783 17126359 ~ 17187630 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 579810 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 1590157 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1620659 18555235 ~ 18558217 (-)
G129566 NA other upstream 1954189 18888765 ~ 18889757 (-)

Expression


Co-expression Network