AMCG00001155 (LOC107586362)


Basic Information

Item Value
gene id AMCG00001155
gene name LOC107586362
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 16998617 ~ 17000562 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00001155
ATGGCATGCCTTAACACTGATTCCACCTGTGCACACAGTCTAGACCTGCCCTCCCCAGAAGGAGCCAGTCACTTTACCTATTACTTCCAGCCGTCGCCAAGCACCCTGGAGTCTGTGGTCACTTCTGCTCACTTCTGGTTCTTCAGCGGAGAGACGTCCCAGGCAGACAACACGTCAACCCCTCTCTTCATCCTCACCACGCATCAGCAGCTAGCCCAGGTTGCAGAAAGCCCAGAGAAGAGATCAGGTGACGGGTGGACCACCTACCACATCGGCAGACTTTTCCACCCCCTTTTGGCTGACGGGCCCTTCGTTCTCCAGGTCAGGTGCCCCACTTGCGGCTGCCACTCCGAACCTGATAAGATGCCCTTCCTACATCTGCACACACACCCCAAAGGTCCAGAGCGCTCACGGAGGTCTACCATTCCCTGGTCACCCTCGGCCATAGATCTCCTCCAAAGGCCAGGTCAAGAGAAGCCCAACTATAATGACTGCCACCGGGCAGAACTCAATATTTCTTTCGAGGATCTGGGCTGGGACAACTGGATTGTCCATCCCAAAGTGCTCACCTTCCACTACTGCCATGGCAACTGCTCCAGCTGGGATCGAATGACCACCATTTTGGGGATCAAGCAATGCTGCGCACCTGTGCCCGGGACCATGAAGTCACTCCGGTTTCGGACCACCTCTGATGGAGGCTACTCCTTCAAATATGAGACTCTGCCCAACATCATTGCTGAGGACTGTGCCTGCATTTAGCtcctgtgaaatgtaaaaaataaataataatccagTTTACTCTGCTATTCAGTGCATACTCTGGAAGTTGTATCAAAgcgtattaaaatgtttattccGCTGAAATACTGAGCCTTAGATAAGtcgtgtgtgtacatatatattcaatacTGGTTATATGTCTGATTACATTTGTCCTGCAtgctttgctgttgtttgttttgagtaAATCATTATTTACACATAAAATAGCACCTACTCATAACATACAGTAAGATTTCTGCAAACTaatgtacagtaaaagtgtAAATTATGGCACTAACACTTCTTGCTTTACAACAAAATCCAAGAACACCTATgccttttataaataaattaatcaatctaATTAATCAACTTCAGGATTCCATGATCTGACCAGTAATTACATCATGTAAATTAGCTGCCGTAGAATAGAAAATCGCTCCTTTGCACCTAGGTTTGCTGCTTCGTTTACAACTAATACCACCGCCACTActacgaataataataatatgcagtgtttttacACCACTAGAGGGCGGTGCAGTTACAGGCTGCTTTACGATGTTTGTAAATAGAGTTAGCTATAGTTTCagactactgctactactactactacacattATTATTGATATCAGTACTAGTTATACGtgtaagaaaaaatatgaataatgtaacCTAAGAAACACAGTTCATTTAGATTATGGTCATAGTCATGGTATTCTGCAATGATTGTTTTCTGCACTCTTTGTTACTATCCCTCATAAACGCtgctaataataaatagcaCACATATAGTTAAACATAAGCAACATAGTAGCATTTTAACAGCTCGGCAATGTCCATGTGGTGCAGTAGGCCCATTCTGTAAAGGtacaattgttttacattttgtctttacGGTTCTTTTTAGAacagttcaattaaatacagttaatttagaaaaaatgctcatatttgcttttttttatcatgaaCAGGCTATGTTGctgttcatttgtttctttgctgattctaagctgtttttttgttcaaatatttgtatgtaaagcacaaattaaacttaaaaaggCAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC107586362

GO: NA

KEGG:

id description
K05500 INHA; inhibin, alpha

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00001155 True 1834 mRNA 0.42 2 16998617 17000562

Neighbor

gene id symbol gene type direction distance location
AMCG00001151 NA coding downstream 64041 16894843 ~ 16934576 (-)
AMCG00001150 NA coding downstream 125890 16857154 ~ 16872727 (-)
AMCG00001145 NA coding downstream 599187 16395035 ~ 16399430 (-)
AMCG00001144 arpc2 coding downstream 676881 16311684 ~ 16321736 (-)
AMCG00001143 NA coding downstream 692934 16297028 ~ 16305683 (-)
AMCG00001160 NA coding upstream 313503 17314065 ~ 17320529 (-)
AMCG00001164 NA coding upstream 440154 17440716 ~ 17486990 (-)
AMCG00001167 ube2g2 coding upstream 486835 17487397 ~ 17496135 (-)
AMCG00001163 NA coding upstream 522890 17523452 ~ 17537225 (-)
AMCG00001166 LOC103370188,LOC102799206,LOC101480403,LOC102206624,LOC102301787 coding upstream 544021 17544583 ~ 17593861 (-)
G129125 NA non-coding downstream 3209 16923711 ~ 16995408 (-)
G129126 NA non-coding downstream 57335 16940667 ~ 16941282 (-)
G129065 NA non-coding downstream 118132 16876311 ~ 16880485 (-)
G129042 NA non-coding downstream 424018 16520181 ~ 16574599 (-)
G129033 NA non-coding downstream 620302 16353435 ~ 16378315 (-)
G129213 NA non-coding upstream 330898 17331460 ~ 17331681 (-)
G129273 NA non-coding upstream 710335 17710897 ~ 17761905 (-)
G129286 NA non-coding upstream 778354 17778916 ~ 17782649 (-)
G129358 NA non-coding upstream 971447 17972009 ~ 17976917 (-)
G129370 NA non-coding upstream 1056578 18057140 ~ 18057666 (-)
AMCG00001127 NA other downstream 1089491 15519616 ~ 15909126 (-)
AMCG00001118 hibch other downstream 1565148 15364067 ~ 15433469 (-)
AMCG00001119 ftcd other downstream 1566287 15409170 ~ 15432330 (-)
G128741 NA other downstream 1818295 15179241 ~ 15180322 (-)
G128628 NA other downstream 2400047 14592699 ~ 14598570 (-)
AMCG00001156 NA other upstream 125797 17126359 ~ 17187630 (-)
AMCG00001165 LOC100709166,LOC105019893,LOC103392195,LOC107668404 other upstream 513824 17514386 ~ 17521270 (-)
AMCG00001193 NA other upstream 1524171 18524733 ~ 18532689 (-)
AMCG00001196 RPL37A,rpl37a,zgc:171772,rl37a,LOC107564751,LOC107567628 other upstream 1554673 18555235 ~ 18558217 (-)
G129566 NA other upstream 1888203 18888765 ~ 18889757 (-)

Expression


Co-expression Network